Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1084 |
Symbol | |
ID | 5407661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 987120 |
End bp | 988328 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640872429 |
Product | MacA |
Protein accession | YP_001408249 |
Protein GI | 154173681 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA TCATTAAAAT TTCTATCCTT TTGCTGATCG TAGCGCTGGC GCTAGCTTTC GTCTACGATA AGTATTTCAA GACTAGCGGC GAAAGGGTGG AGTTTATAAC CCAAAAAGCC GTCAAAGGAT CGTTTTCTAA AAAGGTAGAC GCCACGGGCG AAATTTTTGC TACCGAGCTC GTAGATGTGG GCGCTCAGGT GGGCGGTCAG ATAAAAAAAC TATATGTAAA GCTAGGCGAT AATGTCAAAA AGGGCGATCT CATAGCTGAG ATAGACAGCT CCACACAGCA AAATAACGTC GATAACAAAG AGGCGCAGCT TAGGATATAT GAGGCGCAGC TAGAAAGCGC AAAGGTCGCA CTGGATATCT CTAAAACGCA GTATGAGCGC GAAAAGGGGC TTTTTGCGAA AAACGCCACC TCAAAGCAAG AATTTGAGAC CGCAAAAAAT ACATACGCTT CAAACGAGGC GAAACTAAAA GAGATAAAAG CGCAGATCAA CCAGACAAAT ATCGAGCTAA GCACCGCTAA GATCGACCTT GGCTATACTC GTATCGTAGC GCCTAGAGAC GGCACGATCG TCTCCGTGCA AGTAGAGGAG GGGCAGACCG TAAATTCAAA CCAAACGACG CCTACTATCG TAAATATCGC CGATCTAAGC AAGGTAAAAA TGAAAATGCA AATCGCCGAG GGCGACATAA CAAAGATAAA AGTCGGCACT CCGGTCGAGT ACTCCATACT CTCCGAGCCA AATACGAAAT TTCAAACCGA GGTGAGCTCG ATAGATCCGG GGCTCACGAC TCTTAGCGAT GGCTCGTATT CAAGCACCTC CAGCAGCTCC AGTTCTCATT CAAGTAGCTC CACGAGCTCC AGCTCGGCGG TTTATTATTA CGCTCAAAGC ATAGTGGATA ACAAAGACGG GATTTTACGC ATCGGCATGA CGACGCAAAA CACGCTTCTG GTTGCAAAGA TAGAAGACGC GATCATCATA CCTACCATAG CTATCAAAAA AGAGGGCGAC AAGAGCTTCG TTTATGTGCT AAAAGATAAA CAAAACACGG TAAAAACGCA GGTACAAACA GGCATAAGGG ACAACCTCGA CACTCAGATC ATAAGTGGCA TAAACGAGGG CGACGAGGTC GTGACCTCGC AAAGCACAGC AAGCGAGATC GCTAAAATGG TCGAGAAAGA AAATAGAGGT CCAAGGTGA
|
Protein sequence | MKKIIKISIL LLIVALALAF VYDKYFKTSG ERVEFITQKA VKGSFSKKVD ATGEIFATEL VDVGAQVGGQ IKKLYVKLGD NVKKGDLIAE IDSSTQQNNV DNKEAQLRIY EAQLESAKVA LDISKTQYER EKGLFAKNAT SKQEFETAKN TYASNEAKLK EIKAQINQTN IELSTAKIDL GYTRIVAPRD GTIVSVQVEE GQTVNSNQTT PTIVNIADLS KVKMKMQIAE GDITKIKVGT PVEYSILSEP NTKFQTEVSS IDPGLTTLSD GSYSSTSSSS SSHSSSSTSS SSAVYYYAQS IVDNKDGILR IGMTTQNTLL VAKIEDAIII PTIAIKKEGD KSFVYVLKDK QNTVKTQVQT GIRDNLDTQI ISGINEGDEV VTSQSTASEI AKMVEKENRG PR
|
| |