| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0808 |
|---|
| Symbol | |
|---|
| ID | 5407229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1140140 |
|---|
| End bp | 1140820 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640872582 |
|---|
| Product | alkaline phosphatase synthesis transcriptional regulatory protein PhoP |
|---|
| Protein accession | YP_001408399 |
|---|
| Protein GI | 154174385 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000531821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA TTTTAATGAT AGAAGACGAT ATGGAACTAG CCGAAATTTT GACCGAATAT
CTGGAAAACT ACGATATCAA AGTAACTACC GCAGAGGAGC CTTATATCGG GCTATCCACG
CTAAATACAG GAGAATTCGA CCTTGTCATA CTAGATCTCA CGCTACCGGG GATCGATGGG
CTCGAGGTTT GCAAAGAGAT AAGAAAAAAT CACAACATCC CTATCATCAT ATCAAGCGCC
AGACACGATA TAACCGATAA AGTAAATGCA CTTGACAACG GAGCGGACGA CTATTTGCCA
AAGCCTTATG ACCCGCAGGA GCTCTTAGCT CGTATCAAAA GCCATTTGCG CCGTCAAAGC
GTGAGCGCGA GCGATGAGAG CGTGCAAAAT CAGCAAAAAG ATATCGTTTT AAAAGACTAC
GAGCATGAGA TATATTTCAA GGGTGCACCG CTAAATTTAA CGGCTGCCGA GTATGACATA
CTAAAATATC TCTTACAAAA AGAAAGCGGC GCCGTCACGC GTGAGGAGCT CATCTATAAC
TGTGAGAGCA TAAACGAGGA CAGCTCGAAC AAAAGTATCG ACGTCATCAT CGGCAGGATC
CGCTCAAAAC TCGGGGAAAA CCCAAAAGAG CCGCGTTACA TCCACGCTAT ACGCGGTATC
GGCTATAAGT TAGTATTATA A
|
|---|
| Protein sequence | MIKILMIEDD MELAEILTEY LENYDIKVTT AEEPYIGLST LNTGEFDLVI LDLTLPGIDG
LEVCKEIRKN HNIPIIISSA RHDITDKVNA LDNGADDYLP KPYDPQELLA RIKSHLRRQS
VSASDESVQN QQKDIVLKDY EHEIYFKGAP LNLTAAEYDI LKYLLQKESG AVTREELIYN
CESINEDSSN KSIDVIIGRI RSKLGENPKE PRYIHAIRGI GYKLVL
|
|---|
| |