| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0686 |
|---|
| Symbol | alaS |
|---|
| ID | 5406830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 1288259 |
|---|
| End bp | 1290817 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640872729 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_001408546 |
|---|
| Protein GI | 154174082 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00144447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TAGACGTAAG AGAAGCTTAT CTGAATTTTT TTAAATCAAA AGGACATGAG
ATCACCCCCT CCGCGCCGCT CGTGCCAAAC GACGCGACGC TACTTTTCAC AAACGCCGGC
ATGGTGCCGT TTAAGAGCAT TTTCACAGGC GAAGTACCGC GCCCTACCCC ACCGATCCGC
ACCAGCTGTC AGACCTGCAT ACGCGCCGGC GGCAAGCACA ACGACCTTGA CAACGTCGGC
TACACTGCGC GCCACCACAC GTTTTTTGAA ATGCTGGGCA ATTTTAGCTT CGGCGAATAC
TTCAAAAAAG ACGCGATCGC CTACGCGTGG GAATTTGTAA CGCAAGTATT AAAACTGCCA
GTTGATCGCC TTTACGTGAC CGTTCATGAA AGCGATGACG AAGCATTCGA GCTTTGGGCG
CGGCACATCG CAAGAGACAG AATTTACCGC TTTGGCGACC ACGATAACTT CTGGCAAATG
GGCGACACTG GGCCTTGCGG ACCATGTAGT GAAATATTTT ACGATCAAGG CGGCGAGCAT
TTTAATACGC CCGAGGACTA CATGGGCGGA GACGGCGATC GTTTCCTTGA AATTTGGAAT
TTAGTCTTTA TGCAATACGA ACGCTCGGCG GACGGCAAAC TAAGCCCGCT ACCAAAGCCA
AGCATCGACA CGGGCATGGG CCTAGAGCGC GTCACGGCGA TAATGGAGGG CAAATTTAGC
AACTACGACA GCTCGCTTTT CATGCCGCTC ATCGACGAGG TCGCGAAGCT TTGCGGCAAG
CCTTACAGCT ACGATAGCGG GGCTAGCTAC CGCGTCATCA GCGATCACAT CCGCTCGGTC
ACGTTCCTGC TCGCTCAAGG CACAACGTTT GATAAAGAAG GCCGCGGATA CGTGCTTCGC
CGCATCTTGC GCCGTGCGAT CCGCCATGGC TATCTACTAG GTATCAAGGA GCCCTTTATG
TATAAGCTCG TGGATAAGGT CTGCGAGATG ATGGGCGGAC ACTACACCTA TCTAAACGAG
AAAAAGGCGG CGGTCAAGGA ACAGGTGCGC CTGGAAGAGG AGAGATTTCT AGCGACGATC
GCCTCAGGGC TTGAGCTATT TAACGAGGAG CTAGCCAAAA CCAAAGAAAT TTTTAGCGGC
GAAACGGCGT TTAAGCTTTA CGACACCTAC GGCTTTCCGC TCGATCTCAC CGCCGATATG
CTGCGCGAAA AGGGACTAAA AGTCGATGAA GCTAAATTTG ACGAGCTCAT GAGCGAGCAA
AAAGCGCGAG CGAAAGCTGC ATGGAAAGGC AGCGGTGACA AGAGCTCAAA GGGCGATTTT
AAACAGCTTC TTGAAGAGTT TGGCGAAAAT AAATTTAGCG GCTACGACGA GCTAGAAAGA
CAAAGCAAAA TTTTAGCCCT GCTTGATAAT GATTTTAAAC GAGTGCAAAA TTTACGCGCA
GGCGAGAGCG GCTGGGTGAT GTTTGACGTG ACGCCGTTTT ACGCGCAAAG TGGCGGTCAG
ACGGGCGATA CGGGCGAGAT CACGGGCGTA GGTAAAGTGC TGGATACGCA AAAATTTCAC
GGGCTAAATT TATCCCAAGT CGAGGTAGGC AAGCAGATAA AAACGGGCGA TGTGCTAAAT
TTAAAGGTCA GCGACGCAAG GGCTGAGATA GCGCGCCACC ACTCGGCAAC GCATTTGCTG
CACGCTGCGC TGCGTAAAAT TTTAGGCACG CATGTGGCGC AAGCTGGCTC GAACGTCGAA
GCAGACAGGC TTAGATTTGA CTTCTCGCAT CCAAAGGCGC TAACGAGCGA GGAGCTAGAA
ATGATAGAAA AATTTGTAAA TGACGCCGTG GCAAGCAGCG CGGCGGCAAA GACTGAAATA
ATGGATATCG AAGCTGCCAA AAATAGCGGT GCGATCGCGC TTTTTGGCGA GAAATACGCC
GAAAATGTGC GCGTGCTAAG CCTTGGCAAT GTGAGCAAAG AGCTTTGCGG CGGAACGCAC
GTAAAAAACG TGAGCGAGAT AGGAGCGTTT TTCATCACCA AAGAAAGTGG CGTGAGTGCG
GGCGTGCGCC GTATCGAGGC GGTCTGTTCG CGTGCTGCGC TAAATTTGGC TCGCGGTTTT
AGAAGCGAGC TGGCCGAGAT TTCAAACGAG CTAAAAACAA ACGAGCCGAT GGTCGCCATT
AAAAAGCTAA AAGGCGAGGT GCGCGAGCTA AAAGATAAGC TCAAAAACAT CGGCGACTCC
CATGCCATCG CATTTACGAG CATAAATGAT ACGAAAATGG GCGTTGCCGT CGTCAAAAGC
GGCGACATCA AAACGATGAT AGATAATTAC AAAAACGAAT TTGCCAGCCT TGCTATTTTG
CTATTACAGG TAAATGACGA CAAGATCGCG ATCGCTGCGG GCGTGAAAAA CGCTCCGATA
AAAGCCGGCG AGTGGGTCAA AATGGCGGCT AAAATTTTAG ACGGAAACGG CGGCGGACGC
GATGACTTCG CCACGGCAGG TGGTAAAAAC GTGCCGATGA TAGAGACCGC CGTCAAAGAA
GCGTTTGAAT TTGCGAAAGA GAAGCTACTA AATGCCTGA
|
|---|
| Protein sequence | MQNLDVREAY LNFFKSKGHE ITPSAPLVPN DATLLFTNAG MVPFKSIFTG EVPRPTPPIR
TSCQTCIRAG GKHNDLDNVG YTARHHTFFE MLGNFSFGEY FKKDAIAYAW EFVTQVLKLP
VDRLYVTVHE SDDEAFELWA RHIARDRIYR FGDHDNFWQM GDTGPCGPCS EIFYDQGGEH
FNTPEDYMGG DGDRFLEIWN LVFMQYERSA DGKLSPLPKP SIDTGMGLER VTAIMEGKFS
NYDSSLFMPL IDEVAKLCGK PYSYDSGASY RVISDHIRSV TFLLAQGTTF DKEGRGYVLR
RILRRAIRHG YLLGIKEPFM YKLVDKVCEM MGGHYTYLNE KKAAVKEQVR LEEERFLATI
ASGLELFNEE LAKTKEIFSG ETAFKLYDTY GFPLDLTADM LREKGLKVDE AKFDELMSEQ
KARAKAAWKG SGDKSSKGDF KQLLEEFGEN KFSGYDELER QSKILALLDN DFKRVQNLRA
GESGWVMFDV TPFYAQSGGQ TGDTGEITGV GKVLDTQKFH GLNLSQVEVG KQIKTGDVLN
LKVSDARAEI ARHHSATHLL HAALRKILGT HVAQAGSNVE ADRLRFDFSH PKALTSEELE
MIEKFVNDAV ASSAAAKTEI MDIEAAKNSG AIALFGEKYA ENVRVLSLGN VSKELCGGTH
VKNVSEIGAF FITKESGVSA GVRRIEAVCS RAALNLARGF RSELAEISNE LKTNEPMVAI
KKLKGEVREL KDKLKNIGDS HAIAFTSIND TKMGVAVVKS GDIKTMIDNY KNEFASLAIL
LLQVNDDKIA IAAGVKNAPI KAGEWVKMAA KILDGNGGGR DDFATAGGKN VPMIETAVKE
AFEFAKEKLL NA
|
|---|
| |