Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0474 |
Symbol | |
ID | 5407476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 621149 |
End bp | 622120 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640872058 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_001407891 |
Protein GI | 154173855 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTAATT TCGTCCAAAC GCAAAGCTCG AGGCTTGATG TGGCGCTGGC AAGCGAGCTC AAAATTTCGC GCAACCAGGC TACAAATTTG ATCAAAAACG CCCTTGTGAG CGTAAATTCA AAGCCTGCTT TAAAGCCCTC CATGCAACTA AATCAAAATG ATGAAATTTG CGTGAAATTT GCCCTGCCAA AGGAAAAAAC GAACGATTAT GAGGCAAATT TTGAAATTCC TGTCATTTAC GAGGATGAGG ATATCTTGGT GCTAAATAAA CCCCCTCAAA TAGTCGTCCA CCAAGCCCCA AGCGTCAAAG AGGCCACGCT CGTAGAATGG CTCAATCAAA AAGGCTTCAT GCTCTCGAAT CTAAACGGCG ATCTGCGTGC GGGTATCGTT CATAGACTGG ACAAAGGCAC GAGCGGAGCG ATAGTCGTCG CTAAAAATAA CGCCGCACAC GCAGCCTTGA GCGCTCAGCT AAACGATAAA AGCATGGGCA GGATCTACCT GGCGCTGACC GATCTGCCAC TAAAGCAAGA GTGCATAATC GACAAGCCTA TCGGCAGGAG CCCGTCAAAT CGCCTGAAAA TGGGTATAGT CACAAACGGA CGCCACGCTA AAAGCGCCTT TTTAAATTTA GTGCAAACGG ACGAGGTAAA TTTGATAGCC GCAAAGCTTT TTACAGGCCG TACCCATCAG ATAAGGGCGC ACCTAGCCAG CATAAATCGC CATATTTTGG GGGATAATTT ATACGGATTT AAGAGCGAAA ACGATAAAAT CAAGCGAGTT ATGCTCCATG CTTATATGCT TTATTTCTTC CATCCGCGAA GCGGCGAGAA GGTCGAATTT ATCGCGCAAA CATGGGATGA CTTTAACCAG ATCGTATATA AAAAAATTTC CAAGGAGTTA TTTGATGAGA AAATTTGTCC GAAGTCTCTT GACGCCGCTT TTAGCGGCAT TGATAGCTGG ATGCGCATCT AG
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Protein sequence | MVNFVQTQSS RLDVALASEL KISRNQATNL IKNALVSVNS KPALKPSMQL NQNDEICVKF ALPKEKTNDY EANFEIPVIY EDEDILVLNK PPQIVVHQAP SVKEATLVEW LNQKGFMLSN LNGDLRAGIV HRLDKGTSGA IVVAKNNAAH AALSAQLNDK SMGRIYLALT DLPLKQECII DKPIGRSPSN RLKMGIVTNG RHAKSAFLNL VQTDEVNLIA AKLFTGRTHQ IRAHLASINR HILGDNLYGF KSENDKIKRV MLHAYMLYFF HPRSGEKVEF IAQTWDDFNQ IVYKKISKEL FDEKICPKSL DAAFSGIDSW MRI
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