Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0322 |
Symbol | ispG |
ID | 5407490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 1234916 |
End bp | 1235974 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640872679 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001408496 |
Protein GI | 154173863 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.719232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAGAT ACCCAACTAA ACAGATCAAA ATTCGCGATG TAGCCATCGG CGGGGACGCG CCTATCCCAG TGCAGTCGAT GACATTTTCA AAGACCAAGG ACGTTAAGGG CACGCTCGCG CAAATTCAGC GCCTTTATTT TGCTGGCTGC GATATAGTGC GCTGCGCCGT GCTCGACAAG GAGGACGCCA AGGCCCTGCG CGAGATCGTG GCAAAAAGCC CGCTGCCGGT TGTCGCGGAC ATTCATTTTA ATCACATCTA CGCCGTAATG GTGAGCGAAT ACGTCGATGC CATACGCATC AACCCCGGAA ATATAGGCTC AAAAGAGCGG ATAAAAGCGG TCGTAGACGC GTGCAAGCAG CGCAAGATAC CTATCAGGAT CGGTGTAAAT TCAGGCTCGC TCGAAAAGCA GTTTGAAGAG CGATACGGGC GTAGCGTCGA GGCGATGGTA GCGTCCGCGA TGTATAACAT AAATTTACTC GAGGACTTTG ACTTCACCGA CATCAAAATT TCGCTCAAAT CAAGCGACGT GGAGCGCACC ATGCAGGCCT ACCGCACGCT TCGCCCAAAG GTGCCCTACC CTTTTCATCT GGGCGTGACG GAGGCAGGCA CTACCTTTCA CGCGACGATA AAGTCTGCGA TCGCGCTTGG CGGGCTGCTG CTGGAGGGTA TCGGCGACAC GATGAGAGTC AGCATCACGG GTGAGTTGGA AGAGGAGATC AAGGTCGCAA AGGCGATCTT AAAAGACAGC GGACGTCAGC GCGAAGGGCT AAATATCATC TCCTGCCCTA CTTGCGGGCG TTTGCAAAGT GACCTGATGA AAGCGATCAA GATCGTCGAG GAAAAGACGA AGCACATAAA AGAGCCGCTA AACGTCTCCG TGATGGGCTG CGTGGTAAAT GCGATCGGAG AGGCGAAGGG TGCTGACGTG GCGATAGCCT TTGGCAAGGA GAGCGGGCTA ATAATGCGCC GCGGCGAAGT CGTCGCGAGA CTAAAAGAGA GCGAGCTGGT CGATCGCTTC CTCGCCGAGA TAGATGATGA GATAAAATCA AGAGAATAA
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Protein sequence | MQRYPTKQIK IRDVAIGGDA PIPVQSMTFS KTKDVKGTLA QIQRLYFAGC DIVRCAVLDK EDAKALREIV AKSPLPVVAD IHFNHIYAVM VSEYVDAIRI NPGNIGSKER IKAVVDACKQ RKIPIRIGVN SGSLEKQFEE RYGRSVEAMV ASAMYNINLL EDFDFTDIKI SLKSSDVERT MQAYRTLRPK VPYPFHLGVT EAGTTFHATI KSAIALGGLL LEGIGDTMRV SITGELEEEI KVAKAILKDS GRQREGLNII SCPTCGRLQS DLMKAIKIVE EKTKHIKEPL NVSVMGCVVN AIGEAKGADV AIAFGKESGL IMRRGEVVAR LKESELVDRF LAEIDDEIKS RE
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