Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0274 |
Symbol | rho |
ID | 5407614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1310831 |
End bp | 1312171 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640872754 |
Product | transcription termination factor Rho |
Protein accession | YP_001408571 |
Protein GI | 154173724 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000543073 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA CCCCAAATCA AGCCATTGTG GCTGAAAATC AAAAAACGAC TAAAAAATAC CCGAGCACTC GCACGCATAT CCCAGTCGAC GGACACAAGA TCGAGGAGCT TCGCACCCTA AGCCTAGAAG ATCTCATCGC TATCGCAAAC GAGGTCGGTG TCGAAAATCC GCGCGAATTT CGCCGTCAAG ACCTCATTTT TGAAATTTTA AAAGCCCAGA CCAAACAAGG CGGCTTCATA CTTTTTACCG GCATTTTGGA GATCACGAAC GAAGGATATG GCTTCTTGCG CTCGGTCGAT GCAAATCTAA GCGACAGCTC AAATGACGCC TACGTCTCAA ACTCTCAAAT CCGTAAATTT GCCCTGCGCG TGGGCGACAT CGTCACGGGA CAGGTTCGCG AGCCAAAAGA TCAGGAAAAA TACTACGCTT TGCTAAAAAT CGAAGCGTTA AACTATATGC CCCTCATTGA GGCAAAAGAG CGACCGCTTT TTGACAACCT GACGCCGCTT TTCCCGACTG AAAAGCTGCA CCTCGAATAC GATCCGATGA AGCTCACCGG ACGCGTACTC GATCTTTTCA CACCGCTTGG CAAGGGTCAG CGCGGGCTCA TCGTTGCCCC GCCAAGGAGC GGTAAAACCG AGCTCATGAA GGAGCTGGCT CACGGCATCG CTAGAAACCA CCCCGAGGCG CATCTGATGG TACTTCTAGT CGATGAGCGT CCCGAGGAGG TTACCGACAT GCAGCGCTGC GTCAAGGGCG AGGTGTTTAG CTCGACGTTT GATCTGCCAG CACTTAATCA CGTGCGCGTC GCCGAGCTCG TCATCGAAAA GGCAAAGCGA CTTGTGGAGA TGGGCAAGGA CGTCATCATC TTGCTTGATA GCATCACGCG TCTAGCACGC GCTTACAACA CCGTGACCCC GCCAAGCGGC AAGGTGCTAA CTGGCGGCGT GGATGCAAAT GCGCTGCATA AGCCAAAACG CTTTTTTGGA GCGGCGAGAA ATATCGAATT TGGCGGTAGC CTGACCATAA TCGCGACCGC GCTCATCGAC ACCGGCTCGC GTATGGACGA GGTTATTTTT GAGGAATTTA AAGGCACGGG CAACAGTGAG ATCGTGCTGG ATCGAAACAT CTCCGACCGC CGAATTTACC CCGCTATCAA CGTCCTAAAA TCCGGCACCA GAAAAGAAGA GCTGTTGCAA AAGCCTGACG AGCTGCAAAA AATTTGGGCT ATCCGCTCGG CGATCGCGAC GATGGATGAT GTGGAAGCGC TTAAATTCTT ATACGCGAAG ATGCTTAAAA CAAAAGACAA TAAAGAGCTT CTGTCTATAC TAAACGAGTA A
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Protein sequence | MENTPNQAIV AENQKTTKKY PSTRTHIPVD GHKIEELRTL SLEDLIAIAN EVGVENPREF RRQDLIFEIL KAQTKQGGFI LFTGILEITN EGYGFLRSVD ANLSDSSNDA YVSNSQIRKF ALRVGDIVTG QVREPKDQEK YYALLKIEAL NYMPLIEAKE RPLFDNLTPL FPTEKLHLEY DPMKLTGRVL DLFTPLGKGQ RGLIVAPPRS GKTELMKELA HGIARNHPEA HLMVLLVDER PEEVTDMQRC VKGEVFSSTF DLPALNHVRV AELVIEKAKR LVEMGKDVII LLDSITRLAR AYNTVTPPSG KVLTGGVDAN ALHKPKRFFG AARNIEFGGS LTIIATALID TGSRMDEVIF EEFKGTGNSE IVLDRNISDR RIYPAINVLK SGTRKEELLQ KPDELQKIWA IRSAIATMDD VEALKFLYAK MLKTKDNKEL LSILNE
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