Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0094 |
Symbol | |
ID | 5407356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 114794 |
End bp | 115684 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640871574 |
Product | periplasmic solute binding protein |
Protein accession | YP_001407416 |
Protein GI | 154173905 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000753569 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA TTTTCACTTT GCTAGTCATA AGTGCAGTTG CATTATTTGC CAAACCTATC GTAACCGCAA GCATTTTGCC GACAAAATAC TTCATCGAGC AGATCGCCGG CGACACGCTT GATGTCAATG TCATGGTCGG CAAGGGCGCA GACCCGCACA CATACGAGCC AAAGCCAAAG CAGATGAAAG AGCTTGAAAA AAGCAAGCTT TATTTTGCCG TTGGCATCGA GTTTGAGGAC GCTTGGCTGG ATAGATTTTC AAAGACTTAT AAGAATTTAA AGATCGTAAA GACTCAAGAG GGTATCCAAA AGATCGCTAT GAGCGAGGAG CATGAGCACG AACATGACGG CGACAAGCAC CACGAACACG AGCATCATGA TCATGACGGA CATCACCATC ATCATGACGG CCTTGATCCG CACATCTGGC TTGATCCTGT GCTTGTAAAG ACTCAGGCTG AAAATATCGC AAACGCTTTG ATTGCCGAGT TTCCTGCAAA TGCCGAGCTT TACAAGGCGA ATTTAGCTAA ATTCGAGACC AAGCTTGACG AGCTTAATAA ATTCATCTCC GATAAGTTAC AAAACGTAAA GAGCCGCGTA TTTATCGTAT ATCATCCGTC GTGGGGATAT TTCGCTAAAC GCTACAACCT AGAGCAAATC GCTATCGAAG TCGAGGGCAA AGAGCCAAAA CCGACCGATA TTGCCGAGCT AATCGATGAG GCTAAAGAGC ACGGCGTGAA GGTCATTTTC GTAGCTCCGC AGTTTCCTAA AAAAGCGGCT AAGCTGATAG CCGAGCAAGC AGGAGCTACC GTCGAGGAGC TCGATCAATT GCCTTTAAAC TGGCTAGATG AGATGAAAAA AACGGCTGAA ATTTTAGCCC GAAGCCTTTA A
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Protein sequence | MRKIFTLLVI SAVALFAKPI VTASILPTKY FIEQIAGDTL DVNVMVGKGA DPHTYEPKPK QMKELEKSKL YFAVGIEFED AWLDRFSKTY KNLKIVKTQE GIQKIAMSEE HEHEHDGDKH HEHEHHDHDG HHHHHDGLDP HIWLDPVLVK TQAENIANAL IAEFPANAEL YKANLAKFET KLDELNKFIS DKLQNVKSRV FIVYHPSWGY FAKRYNLEQI AIEVEGKEPK PTDIAELIDE AKEHGVKVIF VAPQFPKKAA KLIAEQAGAT VEELDQLPLN WLDEMKKTAE ILARSL
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