Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0083 |
Symbol | |
ID | 5406690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1198654 |
End bp | 1199526 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640872642 |
Product | carbon-nitrogen family hydrolase |
Protein accession | YP_001408459 |
Protein GI | 154173974 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00263831 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CACTTTTACA ACAAAAATTC CACGGCTCAA AAGAGGCGAC CGTAGCAAAA ACCGCGGAGC TCGTGCGCGA GGCGGCGCAG GGTGGGGCGC AGCTAGTGGT TTGTCAGGAG TTGCATCAGA CGCAGTATTT TTGTCAGAGC GAGGATACGA GCTTTTTTGA CCTTGCGGGC GAGTGGGAGG CGGACGTGAG GTTTTGGTCG GACGTAGCGC GTGCAAACGG CGTCGTGCTC GTTACTTCGC TCTTTGAAAA GCGCACCGAC GGGCTTTATC ACAACACGGC TTTTGTCTTT GAAAAGGACG GCAGCATCGC CGGCAAATAC CGCAAAATGC ACATCCCGGA CGACCCTGGC TTTTACGAGA AATTTTACTT TACGCCGGGC GACATCGGCT TTGAGCCTAT CGACACGAGC GTGGGGCGGC TTGGAGTGCT CGTTTGCTGG GATCAGTGGT ATCCCGAGGC GGCGCGTCTC ATGGCACTGC GCGGGGCGAA AATTCTAATC TATCCGACTG CGATAGGCTG GTTTGAAGCC GATAGCGAGG AGGAGAAAGC CCGCCAGCTA GAAGCCTGGG TCGCGGTGCA GCGTGGGCAT GCGATCGCAA ACGGACTGCC AGTCGTCGCG GTCAATCGTG TGGGCTTTGA AAAAGATGAC AGCGGTGTGA TGGCAGGCAT CAAATTTTGG GGCAACAGCT TTGTCTTTGG TGCGCAGGGC GAGCAGCTTT GGCGTGCAGA CAGCCAGAGT GAGCTGTGTA AGATCGTGGA AGTGGATATG AAACGCAGCG AAGAAGTGCG TAGAATTTGG CCTTTTTTAC GCGACCGCCG CATCGATGCG TATGCAAATT TGACGAAGAG GTTTATCGAC TGA
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Protein sequence | MKIALLQQKF HGSKEATVAK TAELVREAAQ GGAQLVVCQE LHQTQYFCQS EDTSFFDLAG EWEADVRFWS DVARANGVVL VTSLFEKRTD GLYHNTAFVF EKDGSIAGKY RKMHIPDDPG FYEKFYFTPG DIGFEPIDTS VGRLGVLVCW DQWYPEAARL MALRGAKILI YPTAIGWFEA DSEEEKARQL EAWVAVQRGH AIANGLPVVA VNRVGFEKDD SGVMAGIKFW GNSFVFGAQG EQLWRADSQS ELCKIVEVDM KRSEEVRRIW PFLRDRRIDA YANLTKRFID
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