Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0072 |
Symbol | |
ID | 5406926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1877825 |
End bp | 1878922 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640873342 |
Product | PDZ domain-containing protein |
Protein accession | YP_001409122 |
Protein GI | 154173630 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.031079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAC TCCTTTTACT CATCTGCTTT GGTGTTTGGC TTTTTGCCGA TCCGCGCCCG ACTCAAGACG ATTTCCACGC TTGCTACGAA AAAAACAAAA ATTCTATCGT GGCTGTGAAT AACCATTTTG GCGTCGTACT CACCAAGGAT CTCATCGCCG TGCCTAAAAA CGGCGAAGCC CCGATAAACG ACTACGTGAA ATTCGATCCT TATTTGCAGC TTTATCTCGT GCGCTCAAAC AGCGATCTAA GCCCCGCCGC GATGGCTGAC GAGACGAACG AGGAGCGCAT AAAAAAGAGC ACTTGGGTCG GGATCTTAAG CGATAACAAT AACACGAAAA TGGGCCACAT AAAAGCGCTC GGGCAAAATT TAGGCGAATT TGACACGCTT AGCTTCGAGT ATAACGCGAC TGGCGAGATA AATACCCCTT GCTGCAAGAT GATAGGCATA AGCGTGGGCG GCGATAAATT TATCCCGAAC CGCTATTTAA AGCATTTTGC GGCGTATGAT GATGTGTATT ACGGCGATAT AGGCGTGAAA TTTTTACCAA AAGACGGCAA ATTTTTCGTG GCGTCGGTCG ATCCTTTGGG CCGAGGCAAG ATGCTGATGG TAAATGACGA GCTTATCAGC ATAAACTCCA AAACGCCAAA GAGCCTAAGA GAGCTAAACG AGGCGATACT CTTTGCGCCA AAAGGCAGCA AGCTAGACAT CATCGTAAAG CGCGACAGAG CCGAGCTTTT ATATCAGGTG CCGGTATCTG GGGATCTAAA ATTTACCCAA AGCCTTGATG CGTTGATGCC AGATAGCATG AGTATGCCAA ATTTAAACAT GATGCCCGGT GAAATTTCCT CGCAGATGGA CGATAAAATT TTAAGAGACT ACGGCATAAG CGTAGGTAAA AATCTAGTCG TGACAAAGGT CGAACCGCGC TCTAACGCCG ATAAATTCGG TATAAAAGTG AGCGATAGGA TATTACAGGT AAATCAAGAA GAGGTCGTAG ATCGCGCTGA TTTGCTAGCA AAGATAGCCG ACCAGCAAAG CTTTTTGCTG CTATTTACAA GGCATGATTT TCAATTTTTT GCGAGAGTTC CTAAGTGA
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Protein sequence | MKKLLLLICF GVWLFADPRP TQDDFHACYE KNKNSIVAVN NHFGVVLTKD LIAVPKNGEA PINDYVKFDP YLQLYLVRSN SDLSPAAMAD ETNEERIKKS TWVGILSDNN NTKMGHIKAL GQNLGEFDTL SFEYNATGEI NTPCCKMIGI SVGGDKFIPN RYLKHFAAYD DVYYGDIGVK FLPKDGKFFV ASVDPLGRGK MLMVNDELIS INSKTPKSLR ELNEAILFAP KGSKLDIIVK RDRAELLYQV PVSGDLKFTQ SLDALMPDSM SMPNLNMMPG EISSQMDDKI LRDYGISVGK NLVVTKVEPR SNADKFGIKV SDRILQVNQE EVVDRADLLA KIADQQSFLL LFTRHDFQFF ARVPK
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