Gene CCC13826_2119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_2119 
Symbol 
ID5596826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1745829 
End bp1746509 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content42% 
IMG OID640930287 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 
Protein accessionYP_001467563 
Protein GI157165480 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000748349 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAGA TTAAAAATTT AAACATTTTT TATAAGGATA AGAAGCTTTT GCGAGAGCTT 
GATTTTGCCA TGGGCGAGGG TAAATTTATA GGTATCACGG GTGCAAGTGG CAGTGGCAAA
TCGCTCTTTG CAAAGAGCTT AATAAGGCTT TTTGATGATG ATTTTAGAGT GAGAGCGGAT
AAATTTAGCA TTTATAAAAA AGATATCTTA AAACTTAGTC AAAATGAGCT AAAAGAGCAC
CGAAAAAAGG TCGCTGCACT CATCTTTCAA AACTCAGTTG CAAGCCTTCA TCCGCTCTTA
AACGTGGGCG ATCACTTTAA TGCATATCTT GGCGGCGATA ATAAATCAAA TAAAGAGCTT
GCATTTGCTT ATTTTAGGGA GTTTGGGCTG GGTAATGCAA ATCTCATCTG GCACAAATAC
TCATACGAGC TAAGTGGTGG CGAGGCGAGC CGTGTGCAGA TCGCTCTGGC GCTTTGCCTG
AAGCCAAAAA TTTTAATCTG CGACGAGATA ACAAGCGGGC TTGATAGCAT TAGCGCTAGC
CACGTGGCGG GCATCTTAGA GAGCCTAAAG GGCAAGATGA GTGTCATTTT TATCTCGCAC
GATGAGGCGC TAACGAACTA TCTTAGTGAT GAAATTTGGC AGATGAGAGA TGGGCGGCTA
AATTTAAAGG AAAATGCGTG A
 
Protein sequence
MIEIKNLNIF YKDKKLLREL DFAMGEGKFI GITGASGSGK SLFAKSLIRL FDDDFRVRAD 
KFSIYKKDIL KLSQNELKEH RKKVAALIFQ NSVASLHPLL NVGDHFNAYL GGDNKSNKEL
AFAYFREFGL GNANLIWHKY SYELSGGEAS RVQIALALCL KPKILICDEI TSGLDSISAS
HVAGILESLK GKMSVIFISH DEALTNYLSD EIWQMRDGRL NLKENA