Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_2119 |
Symbol | |
ID | 5596826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1745829 |
End bp | 1746509 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640930287 |
Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
Protein accession | YP_001467563 |
Protein GI | 157165480 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000748349 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGA TTAAAAATTT AAACATTTTT TATAAGGATA AGAAGCTTTT GCGAGAGCTT GATTTTGCCA TGGGCGAGGG TAAATTTATA GGTATCACGG GTGCAAGTGG CAGTGGCAAA TCGCTCTTTG CAAAGAGCTT AATAAGGCTT TTTGATGATG ATTTTAGAGT GAGAGCGGAT AAATTTAGCA TTTATAAAAA AGATATCTTA AAACTTAGTC AAAATGAGCT AAAAGAGCAC CGAAAAAAGG TCGCTGCACT CATCTTTCAA AACTCAGTTG CAAGCCTTCA TCCGCTCTTA AACGTGGGCG ATCACTTTAA TGCATATCTT GGCGGCGATA ATAAATCAAA TAAAGAGCTT GCATTTGCTT ATTTTAGGGA GTTTGGGCTG GGTAATGCAA ATCTCATCTG GCACAAATAC TCATACGAGC TAAGTGGTGG CGAGGCGAGC CGTGTGCAGA TCGCTCTGGC GCTTTGCCTG AAGCCAAAAA TTTTAATCTG CGACGAGATA ACAAGCGGGC TTGATAGCAT TAGCGCTAGC CACGTGGCGG GCATCTTAGA GAGCCTAAAG GGCAAGATGA GTGTCATTTT TATCTCGCAC GATGAGGCGC TAACGAACTA TCTTAGTGAT GAAATTTGGC AGATGAGAGA TGGGCGGCTA AATTTAAAGG AAAATGCGTG A
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Protein sequence | MIEIKNLNIF YKDKKLLREL DFAMGEGKFI GITGASGSGK SLFAKSLIRL FDDDFRVRAD KFSIYKKDIL KLSQNELKEH RKKVAALIFQ NSVASLHPLL NVGDHFNAYL GGDNKSNKEL AFAYFREFGL GNANLIWHKY SYELSGGEAS RVQIALALCL KPKILICDEI TSGLDSISAS HVAGILESLK GKMSVIFISH DEALTNYLSD EIWQMRDGRL NLKENA
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