Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1972 |
Symbol | |
ID | 5596819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1343923 |
End bp | 1344750 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640929907 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001467188 |
Protein GI | 157165730 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.396519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCTTTC GCACTAAGGC TGATCTAGAT AGTCACCCAT GCTTTAACAA AAAGGCCTCC GCTAGCTACG GACGCGTGCA TCTGCCAGTA GCCCCGCGCT GCAACATCCA GTGCAACTTC TGCAACCGCA TATATGACTG CGCTAATGAA AATCGCCCTG GCGTAACGGC AAAGGTGCAA ACACCAGATG AATCGGTGAA ATTTTTAGAA AAGCTCTTTA AATTTAGACA AGATATATCC GTCATCGGCA TCGCTGGACC TGGCGATCCG ATGTGTGACG CTGACAAGAC GCTAGCAACC TTTGAAAAGT GCAAGTCCCA CTTCCCAAAC GCTCTGCTCT GCCTCTCAAC TAATGGCTTA GCGCTGCCTG AGCATGTTGA TGAGATCGTG CGTCTTGGTG TGAGCCACGT GACAGTAACT GTAAATGCCG TGACGCCAGA TGTTGGCTCA AAGGTCTATT CGTGGGTAAG ATATGAAGGT AAAAACTACT ACGGCGAAGA GGCTGCTAGG ATACTGCTAG CGCGCCAGGA CAAGGGCATC CGCAAGCTAA AAGAGGCTGG CATGCTAGTA AAGATAAACA CCGTAGTCAT CCCTGGGGTC AATATAGACC ACGTCCAAAG CATCTCGGCA AAGGCAAAGC AGTGGGGAGC TGACATAATG AACTGCATGG CGATGATACC GGTGCATGAC ACCCCTTTTG AAAATTTAAA ATCCCCTTCA ACCGAGGAGA TCCACCGCAT ACGAAGATCA ATAGGCGACG ATATAGACCA GATGACGCAT TGCAGTAGGT GCCGCGCTGA TGCATGCGGG AAGCTTGGCG AAAGATAA
|
Protein sequence | MIFRTKADLD SHPCFNKKAS ASYGRVHLPV APRCNIQCNF CNRIYDCANE NRPGVTAKVQ TPDESVKFLE KLFKFRQDIS VIGIAGPGDP MCDADKTLAT FEKCKSHFPN ALLCLSTNGL ALPEHVDEIV RLGVSHVTVT VNAVTPDVGS KVYSWVRYEG KNYYGEEAAR ILLARQDKGI RKLKEAGMLV KINTVVIPGV NIDHVQSISA KAKQWGADIM NCMAMIPVHD TPFENLKSPS TEEIHRIRRS IGDDIDQMTH CSRCRADACG KLGER
|
| |