| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1957 |
|---|
| Symbol | |
|---|
| ID | 5597525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1359859 |
|---|
| End bp | 1361823 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 654 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640929922 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_001467202 |
|---|
| Protein GI | 157164011 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCTT TAAGGATTAA AATTTCTGTT ATTTTGACAG CTGTGATCGT GCTGCTACTA
ATCGGCGTTA GCCTCATTAG TTACAACATA GCTCGCAACC TATATACAGA AAAAGTTGTG
AAAGATGAGC TACCACTAGC TGTCTCTAAC GTTGCAGGTG AGATCGGCTA TGCCATAGAT
AAGATCATCA ACACCTCTTA TCAGATGACT AAAAACGACT ATCTTCTCAA GTGGATCGAT
GAGGGCGAGC CAAAGGACGG ATTAGCAACG CTTTTTAACT ACAACACCGA CCTTATGAAG
GCGTTTAACC TCTCAACGGC GATGTTTGTC TCTGATAAAA CTCTAAACTA CTACACAAAC
GACAAAATTT TAAAGCAGCT TAGCAAGGAC AATCCACGCG ATAGCTGGTA CTTTGACGTT
AAAAATGGCA AAGAGGTAAA TTCTCTAAAC ATCCAAGTCT CAGAAGCTAC TGGCTCGCTA
ACACTTTATG TAAATAGTAA GGTTGAAAAA GACGGCAAAT TTTATGGCGT CAGCGCGATA
GGCATGAACC TTGATGACAT CGTAAATTTA GTCACTTCAA AAACCATGGG CGAGGGCAGT
AAATTCTTAA TGGTTGATTC AAGTGGTATC GTAAAGATAG AAAAGAGCGA CAGGGTCGGC
AAAGTAAATG TAAAAGATGT CCTTGGCAAA GAGAAATTTG ATGTCTTGAT GAATAAAAAT
GGCGGCGTCA TTCGTCACTT TAACGGCACG AGAAATTTGA TAATTGGCTC AAAATATATC
CCAAGCCTTG ATTGGTACCT ATTTGGAGAG ATGGACGAGG ATGTGCTTTT AAAAGATTTG
CATACGCTAT TTTACTCAGC TATCGGCGTT ATCTTGGCAG CGATCATCAT CTCTGTGATA
GTTTCACTTC TAATGTCGTC TTACCTCCTA AAAATCATCC TCAAACTAAA AACAGGCCTG
CTATCTTTCT TTGATCTACT AAATCATAAG ACAAATAAAG CAGATCCTAT AGAGATAACA
TCTAAAGATG AATTTGGTCA AATGGCAGAG CTAATAAACA AAAACACAAA GGCCATTGAA
GATGGTATGA AAGATCAAAG TATATTCATC CAAAAAGCCA ACACCTTTGT AAATGAGATA
AAAGATGGCA ACTATGAAGC AAGCCTAGAA GCTGATACTA ATAACCCAGC TCTAAATCAA
CTAAAAAGCA CATTTAAAGA TCTACAACTT GCTCTTAAAA ATGCAATCTC TTGTAATGGC
AAAGATGTAC TTGATCTACT AAACACTTAT AAAAACCAAG ACTTTACAAA AAGACTTGAT
GATGACGGTA AGATAGCAAG TGGTATAAAC TCTCTTGGCA TAGAAATATC TAAAATGCTA
AATGACAATC TAAACCAAGC TCAAGTACTA GAAGAAAAAG CTAAACTTCT AGCTAGCTCA
GTATCTAAAG TAGCAAGCTC AGCAAACACT CAAGCAAATA GCTTACAAGA AAGTGCAGCA
GCAGTTGAGC AAATGTCTAG CTCAATGAAT GCCATCTCTC AAAAGACAGC TGATGTTATA
AGACAATCAG ATGAAATTAA AAACATCATA ACTATCATTA GAGATATAGC AGATCAAACA
AACCTTCTAG CACTTAATGC TGCAATAGAA GCTGCACGTG CAGGAGAGCA TGGCAGAGGA
TTTGCCGTTG TTGCTGATGA AGTTAGAAAA CTAGCAGAAA GAACTCAAAA ATCTCTTGGT
GAGATAGAAG CAAATACAAA TGTCCTAGCT CAATCAATAA ATGAGATGAG TGAATCAATC
AAAGAGCAAA GTGAAGGCAT AAACATGATA AATCAATCAG TTGCTCAAAT AGATCACCTA
ACAAAAGAAA ATGTTGTAAT TGCAAACCAA GCAAACGAAG TAACATCAGA AGTAGATGAG
ATGGCTAAAG CCATAGTTGA AGAGGTTAGG AAGAAGAGGT TTTAA
|
|---|
| Protein sequence | MKSLRIKISV ILTAVIVLLL IGVSLISYNI ARNLYTEKVV KDELPLAVSN VAGEIGYAID
KIINTSYQMT KNDYLLKWID EGEPKDGLAT LFNYNTDLMK AFNLSTAMFV SDKTLNYYTN
DKILKQLSKD NPRDSWYFDV KNGKEVNSLN IQVSEATGSL TLYVNSKVEK DGKFYGVSAI
GMNLDDIVNL VTSKTMGEGS KFLMVDSSGI VKIEKSDRVG KVNVKDVLGK EKFDVLMNKN
GGVIRHFNGT RNLIIGSKYI PSLDWYLFGE MDEDVLLKDL HTLFYSAIGV ILAAIIISVI
VSLLMSSYLL KIILKLKTGL LSFFDLLNHK TNKADPIEIT SKDEFGQMAE LINKNTKAIE
DGMKDQSIFI QKANTFVNEI KDGNYEASLE ADTNNPALNQ LKSTFKDLQL ALKNAISCNG
KDVLDLLNTY KNQDFTKRLD DDGKIASGIN SLGIEISKML NDNLNQAQVL EEKAKLLASS
VSKVASSANT QANSLQESAA AVEQMSSSMN AISQKTADVI RQSDEIKNII TIIRDIADQT
NLLALNAAIE AARAGEHGRG FAVVADEVRK LAERTQKSLG EIEANTNVLA QSINEMSESI
KEQSEGINMI NQSVAQIDHL TKENVVIANQ ANEVTSEVDE MAKAIVEEVR KKRF
|
|---|
| |