| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1792 |
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| Symbol | |
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| ID | 5596967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 49936 |
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| End bp | 51429 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640928659 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001465981 |
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| Protein GI | 157164262 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCAC GCCTGATCGT CATTTGCCTA CTAGCGATAA ATGCCTTTGG GTGTGCTCTA
TGCTCGCTTT ATAGCCCAAC AGCTCACGTT AGTGCGAAAT TTGTCGCACA CGAAAATAAC
ATCACGCAGA TCGCCTTTAC TTGGACATTT TCGCAAAATT TCTCAGACCT GATGAAGCAA
AATTTTGACC TAAATCAAGA TGAAAAGATA GATGAAAAAG AGCTTAGAAA GATCCGCTTA
AATTTACTAG ACTACCTCGT GCCAAGGCAC TATCTAACGG GCATTGAGTA CTATTACAAG
GATGAAAACG CCACTAAAAT AGAGCCAAAT TTAAATAATT ACAAGCTCTA TTTTGACGAG
GGCAGACTTA AATTTGACGT GAGTTTTAAG ACAAATTTAG TGATCGCTGA TGGACTTGTC
GTGTCGGTTG ATATGGAGGA CAAAGAGGGC TATTTTAACT TCAAATTTAC GCAAAATAAC
GCATTTTTGG TGGGTGAAAG CTTCTGGGCG ATACCAAATT CAAACTCAAA TTTGATATTT
TTTACATTTT CAAGCAAAGA GGCAGCCAAA GCTCACAACG AAAAGCCAGC GCTTAAAGAG
CTGCTAAAAG AGCCAGTAGC AGGCGCGAGC GATGAAAATT TAAGCCAGAT AGATAAGATC
GATGAGGCCA AATTTGACAT CGTCTCAAAA ACTAGCCTAA GCTTGCTTGA TAGGCTAAAG
CAAATTTTAA GAAGCGTGGA TTACAAAAGT CCGCTTGCGT TGCTATTTTT AGCGTTTATC
TCATTTGGCT ATGGCTTTTT GCACGCTGCT GGCGCAGGTC ATGGCAAGGT GCTAACAAGC
TCATATTTTG CCGCAACTGG TGGCAGCTAC AAAAGGGCGT TTTTATTTGC GTTAAAGATC
GGTTTTATGC ACGTTATAGG CGCATTTGTC TTTGTCTTTG CTAGCTTTTT GTTGCTACGA
GAGGTGAGTA ACGACCTTAC CAGAGATACT GCAAGCATAA CGACCGCGTT TTCTGGAGTT
GTGATCTTTT TTGTGGCGAT TTTTATGCTC GTTAAAAAGA TCAAATTTTA TCTCTCAAAC
AAAAATGAGA CTAAATTTTA TATTTTTAGA TCAAATCTAA GTCAAAATTT GAGTAAAAAT
ACAAAATTTA AAAGCGAATG CGGTTGTCAA ATTTGCTCCA CTAAAAAGCC AAAGAGCAAA
GAGGAGTGGC TAGTGGCGGC TGCTGCGGCT CTTGTGCCCT GTCCTGGCAC GATACTAGTC
TTTGTGCTGG CAAATGAGAT AGGCAGCTAC CTTGCAGGCG TGATAAGTGG CCTGTTTATG
GCGCTTGGCA TGAGTGTGGT GATATTTGTA GCGGCAGTTT TTGGCTCAAA GATCAGCACG
AACATTAAGC TAAAAAAGTT TAAAATCTAT GCAGAATTTG CAGCCCTTGG TATCATGCTT
TGGCTTGGAC TTTTCATTTT TATCACGACA TTTACGCAAA AGAGCCTATT TTGA
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| Protein sequence | MLARLIVICL LAINAFGCAL CSLYSPTAHV SAKFVAHENN ITQIAFTWTF SQNFSDLMKQ
NFDLNQDEKI DEKELRKIRL NLLDYLVPRH YLTGIEYYYK DENATKIEPN LNNYKLYFDE
GRLKFDVSFK TNLVIADGLV VSVDMEDKEG YFNFKFTQNN AFLVGESFWA IPNSNSNLIF
FTFSSKEAAK AHNEKPALKE LLKEPVAGAS DENLSQIDKI DEAKFDIVSK TSLSLLDRLK
QILRSVDYKS PLALLFLAFI SFGYGFLHAA GAGHGKVLTS SYFAATGGSY KRAFLFALKI
GFMHVIGAFV FVFASFLLLR EVSNDLTRDT ASITTAFSGV VIFFVAIFML VKKIKFYLSN
KNETKFYIFR SNLSQNLSKN TKFKSECGCQ ICSTKKPKSK EEWLVAAAAA LVPCPGTILV
FVLANEIGSY LAGVISGLFM ALGMSVVIFV AAVFGSKIST NIKLKKFKIY AEFAALGIML
WLGLFIFITT FTQKSLF
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