Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1759 |
Symbol | rpsE |
ID | 5595935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1892371 |
End bp | 1892814 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640930433 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001467703 |
Protein GI | 157164159 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00134618 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT ATAATAGAGA AGAATTTGAA GAAGTAATCG TCGATATCGG TCGGGTTACA AAGGTTGTTA AAGGTGGTCG TAGATTTAGA TTTACAGCTT TAGTTGTTGT TGGTAATAGA AATGGTCTAG TTGGCTTTGG ATATGGCAAA GCTAAAGAGG TGCCAGATGC GATGAGAAAA GCGATTGATG ACGCATTTAA AAATATTATC CACGTTAAGA TCAAGGGCAC AACTATCCCT CACGATGTAG AGGTAAAATA CAACGCAAGT AGAATGCTAC TTCGCCCAGC TAGCGAAGGT ACTGGTGTTA TCGCAGGTGG TAGTGCACGT CCTATTATCG AGCTTGCAGG TATTAAGGAT ATCCTTACTA AATCACTTGG CTCAAACAAC TCAGCAAACG TCGTTCGTGC TACTATAAAA GCACTTAGTT TGCTAAAAAG CTAA
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Protein sequence | MEKYNREEFE EVIVDIGRVT KVVKGGRRFR FTALVVVGNR NGLVGFGYGK AKEVPDAMRK AIDDAFKNII HVKIKGTTIP HDVEVKYNAS RMLLRPASEG TGVIAGGSAR PIIELAGIKD ILTKSLGSNN SANVVRATIK ALSLLKS
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