Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1696 |
Symbol | yckK |
ID | 5595884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1838221 |
End bp | 1842981 |
Gene Length | 4761 bp |
Protein Length | 1586 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640930375 |
Product | amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001467646 |
Protein GI | 157165566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACTC AAGTAGGAGT AATCAAACAA ATCTCAGGCT TAGTGGTAGC TGTAGATCAA AATGGCGTTA GCCGCGTTTT AAAAGTTGGC GACGCTTTAT ATCTTGGGGA GGTTGTAAAG ACCTCTTCAG CTTCTTCTAA AGCCGTAGTT TCAATGGACA ATGGCAAAGA TGTCACCATC TTGGGTGATG AGTCGTTAAA GCTTGACGAA AATGTAGCCG CAGGACAAAA ACCAAATACC GTAGCAGATG TTAATGACTT GCAAAAAGCG TTGTTAAACG GCGATGATCT AACAAAACTA GAGGAGACTG CCGCTGGTGG TAACGCAGCC GCAGCTGGTG GTGGAGATGG CGTTAGCCTT GGTGCAGCGT CGTTTGATGA GGGTGGTCAC TACTCAAATA TCAATGAAAA TTTCCGCTCT ATAGGCGATC TAAACAGCGC AAGAGGTGCT GAGAGGATAG GCGGCGTAAG CGGCGCAGCC GATAATGCTG GTGGTGACGC TGGCTTTGTA GATACTACTA TCCCAACAGT AACTCTAGAT CCAATTAACA ACACTTCAAC AGTAGTAACT GGTAAGGTTC CAAATCCAGA TCCAAATACC ACTGTAATTG TTGAAATTCC TGGTCATACC CCAGTTACAG TTCCAGTAAA TCCTGATGGT ACATTTAGTG TTCCTACGCC AAATAATGAA CCATTAAAAC CAGGTACTGA GGTAAAAGTT ACTCCAAAAG ATGATGCAGG CAATGGTACA CCAGTTACTA CTCCAGTATC AGACGTAACT ATCCCAACAG TAACTCTAGA TCCAATTAAC AACACTTCAA CAGTAGTAAC TGGTAAGGTT CCAAATCCAG ATCCAAATAC CACTGTAATT GTTGAAATTC CTGGTCATAC CCCAGTTACA GTTCCAGTAA ATCCTGATGG TACATTTAGT GTTCCTACGC CAAATAATGA ACCATTAAAA CCAGGTACTG AGGTAAAAGT TACTCCAAAA GATGATGCAG GCAATGGTAC ACCAGTTACT ACTCCAGTAT CAGACGTTGT GCCGCCGCAA GTAGATCTCA CTCCAAAGGC TGACGGCACA GTTGATGTAG TGCCTCACGA CAATGATGCA ACAAAGGTTG AAATTTCATA CACAGATAAT GGTGGCAACA CGCAAACTAT AACCGTGGTC AAAAACCCAA GTGCTGGCTG GGTTGTAGAT AGCACTCCTG GCAAGACGAC AGCTCCAACA GGTGCTTTCA AGCTTGATCC ACATAGTGGC AAGGTCACTA TTAGCGACGA TGCGACAAAA GACAACACTC CAGTGACTGC AAAGGCTACT GATGGCGCTG GCAACACAGC CACAGGCGAG ACTACTGCTC CAGATAAATT TACTATCAAA TTTAATGATG ACGCAGATGG TAGCGGTGTC ATCACAAGAG GCGAGAACTA TGCTGAGGAT GGCGCAAAAG CTACTGCAAC CATCAGCATA CCAAACCTTG CAAAGGACGG CAGCAAGATA CATGTCATAG GCACTGGTAT AAATGACTAT TACACAGTTC ATAAAGATGC TAGTGGCAAC GTTACAAGCG TTATAGATAC AAAAGGGAAC AATGTATTTG ACGGCGATGG CATAAAGGTT AGCTATGACT ATAACCACTA TCAAACAGTT CGTGGAAATG CCGCAAGTAT CACAGCTGAG CTAGAGGGCA CAACCCTTAA AGCTACTTCA AGTGTTAAAT TTGAAAATGT TGGCAAGGCT GAAGTTAAAT TTGTTGAGCT TGATGAGCAT GGCAATGTTT TAAATGAAAA ATCAGATCAA ATAACAAACC AAAATAGAAA TACAGCTATG CTAGATGGTG ATATCAACCA CACTACAGCA CGCATCTCGC TACCTGAGAA TGTTCAAGAC GGCGATGTCG TAACTGTAAA ATATGGATAT GGACCAGATG CAGCTTCTCT TGCAAAAACA GGTGGCACAG ATACGACTGC TTATAAATAT TTCTTAGTTC ATAAAGCAGC TGATGGCTCT ATGACAGTCG ATCAGATCAC TTCAGCTGAT GATAAGACAC CTATAAAAGC TGGTCTTACA TCTACAAATG GTGCTGGCGA GAAATTTGGT ATAGATATCC ACGATATGCC AACAACCACC TATAATCTTA CACACTCACG TGGTATAGAA GTGAGTATAA AAGGTGATGA TCATGCAGAT AAATCTAACG GAAATACATG GATATTTAGA GATAGCATGG AGGCTCCGAA GGTTGAATTT ATAGAAGGTA ACAAAATTTA TAATCCAAGT GTTTCAGGAA GTGGCTCAGG AGCACTAAAT GCTGGTATAA GCGTAGCTGA CGCTATAAAA GACGGCGATA TCAGCCACAC TACAGCTCGC ATAACATTGC CAAAAGTGTT CTCAGACGGC GATAAACTAA CAGTTGCTGT AACTGACTAC AACAAAATTT ATGCTGACAC TGGTGTAAAA CAATACCCAG CAAATAACCC AGAGCCAACA TTTGTTAAGG CATTTATCAT TCACAAAGCA GCTGACGGCA CTGTGACTTT TGACGAGGTC GATGCAGCTG GCAATGTCAT ACATGCAGGC ATCCCAGCGC TAAATAATAA CGCTATCGAA ATAACTGGCG TGCCACTATA TAATATGTAT GAAAATGGCG TTTTGAAGTC AGATTATGTC CATGCAACAG GTGTTGATGC GACTATCACA GACCACCTTA ACCTAAATGG CAACGATAGT GGAAGCAATT TAAGTTTTGC ATTCTTAGCG AATGTAAATG TTGTAACTAT CACAGAGGTG ATCGATGATG TTGCAGGTGG TGTAGATCAC GGCAATGTCA AAGATAACGA CGTAGTAGTA AATGGCGTAA CTAAAAAAGG CCTAACAAAC GACAGCACTC CGACATTTAA CGGCAAGGCG GACCCTAACT CGGTGGTAGA GCTATACGAT GGCACAACAA AGATAGGCAG CAGCAAAGCT GATGATCACG GCAACTGGTC TATCACTCCG GCCACTCCTC TTGGTGAAGG TGCTCATAGT ATCACAGCTT CATCTCCAGC CACAAATGCG ATCAAGGCCT CTGATCCAGC TACTATAACA GTAGATACAG GCACTAAGGT TACATTTGAT AGCGTTACAG ATGATGTTGC AGGCGGCGTT GTAAATGGTA ATGTCAAGGG CAATGATGTG ACAGTTGAAG GCAAAACACT AAAAGGCCTA ACAAACGATA ACACACCAAC TCTATCAGGC AAGGCAGAGG CTGGCTCAAC TGTAGAGATC TTTGATGGTA CAAACAAGAT AGGTCAAGTA GAGGCAAAAG CCGATGGTTC TTGGAAATTT GAAGTGAGCA CTCCACTTAG CGACGGCGAG CATGAGCTTA AAGTAAAAAC TACTGACAAA GCTGGCAACA CAGCCGAGGC TGCTCCAGTA ACCATAACTG TTGATACGAA GATAAATAAT ATGAAGCTTG AATTTATCGA AGATAAAAAC AATGATGGTA AATTTAGCTG GAGTGAAAAT CTTACCAATG AAAACCCAGG ACGAATTGCG TGGAAGATCG ATCTTCCAAA AGATGGTTCA GTAAAAGTGG GAGATGAGCT ATATTACACC GTTAAATCAA ACTATATGGT TGAACAAAAT GGTAAACTTG TTCCTGCTTG GTCTAGTGCA CCTGATACAC GCAGGGTCGT AACTCAAGAA GATATAGACA AAGGCTACAT GGGCTGGAAA GCGACCAATC AAGATGATAT AACAAAGAAA GTCGGTGTCT TTGGGAAAAA TGCTAGCGGA CGCTATGTCG AGGCCGAGGC TTACTTTGTT GATAAAGCTG GAAACAAAAG CCAGGTAACC AAAGATAAGG TTGTCTTTGA CTTTGCAACT ACTAAGATAG ACGGTGATGC TATTTGGCAA ACAAACCAAA TAGGAATCCC ACATCCACAT AATATCAATG CAAGTAATCT TCAAAATGAT ATAGATTTGG ATCGTAATCG CAACTTTGAA ATTACTGCAA AGCGTATAGT CAAAGGTGCT CACATCACTA CAGGAGATGG TGATGATGTG ATTACGGTAG TTGATGGCTG GGGTGGCCGG ATAAATAATC ACTCTAGTGT TGAATTGGGT GATGGTACCA ACATGCTAAA AGTTGCTAGA GATATCGACA AATCAACAGT TACTGCAGGA AGCGGTGATG ATACTGTAAA TGTAGGTAAT TGGATAAGAG AACACTCTGA TATAAATTTA GGTAATGGAA ACAATACCCT TACAGTTGGC AATATAATAG TAAATTCTAC TGTTGCTACT GGTGACGGCA ACGATACTAT AAAAGTAAAA AATGCTATCA TTGGCTCAAC TATAAAATTG GGTGCTGGAG ATGATACTGT TGAAGTTGGT AATAAAGACA TCACAGATAA CACTCTAACA GGCAAGAGCA ATATAGATGG TGGAGATGGT TATGATAAAC TAACTATCAC AAATCCAGGA ACGACTATAA ATTTAAGTAA TATTGCAAGC CAAGCACATA ACTTTGAGGA GCTTAATATC TCTAACAAGA GCCAAAATAC TACTTTAAGC GTTAAGCTAA GTGATGTTAT AAGCTTAACA GATGGTGATA ATACGCTAAA AATAACAGCT GATGCTGAAG ATAAAGTAGA ATTTAAAGAT GCTGGCTGGC AAAAGGGTGC ATCAACTGAC GGCTATACCG CATATACAAA TGATACTAGC GGAACAACTG TTACTGTTGA GATCAAGGAC GAAGTAACAC AGCCTATGTA A
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Protein sequence | MQTQVGVIKQ ISGLVVAVDQ NGVSRVLKVG DALYLGEVVK TSSASSKAVV SMDNGKDVTI LGDESLKLDE NVAAGQKPNT VADVNDLQKA LLNGDDLTKL EETAAGGNAA AAGGGDGVSL GAASFDEGGH YSNINENFRS IGDLNSARGA ERIGGVSGAA DNAGGDAGFV DTTIPTVTLD PINNTSTVVT GKVPNPDPNT TVIVEIPGHT PVTVPVNPDG TFSVPTPNNE PLKPGTEVKV TPKDDAGNGT PVTTPVSDVT IPTVTLDPIN NTSTVVTGKV PNPDPNTTVI VEIPGHTPVT VPVNPDGTFS VPTPNNEPLK PGTEVKVTPK DDAGNGTPVT TPVSDVVPPQ VDLTPKADGT VDVVPHDNDA TKVEISYTDN GGNTQTITVV KNPSAGWVVD STPGKTTAPT GAFKLDPHSG KVTISDDATK DNTPVTAKAT DGAGNTATGE TTAPDKFTIK FNDDADGSGV ITRGENYAED GAKATATISI PNLAKDGSKI HVIGTGINDY YTVHKDASGN VTSVIDTKGN NVFDGDGIKV SYDYNHYQTV RGNAASITAE LEGTTLKATS SVKFENVGKA EVKFVELDEH GNVLNEKSDQ ITNQNRNTAM LDGDINHTTA RISLPENVQD GDVVTVKYGY GPDAASLAKT GGTDTTAYKY FLVHKAADGS MTVDQITSAD DKTPIKAGLT STNGAGEKFG IDIHDMPTTT YNLTHSRGIE VSIKGDDHAD KSNGNTWIFR DSMEAPKVEF IEGNKIYNPS VSGSGSGALN AGISVADAIK DGDISHTTAR ITLPKVFSDG DKLTVAVTDY NKIYADTGVK QYPANNPEPT FVKAFIIHKA ADGTVTFDEV DAAGNVIHAG IPALNNNAIE ITGVPLYNMY ENGVLKSDYV HATGVDATIT DHLNLNGNDS GSNLSFAFLA NVNVVTITEV IDDVAGGVDH GNVKDNDVVV NGVTKKGLTN DSTPTFNGKA DPNSVVELYD GTTKIGSSKA DDHGNWSITP ATPLGEGAHS ITASSPATNA IKASDPATIT VDTGTKVTFD SVTDDVAGGV VNGNVKGNDV TVEGKTLKGL TNDNTPTLSG KAEAGSTVEI FDGTNKIGQV EAKADGSWKF EVSTPLSDGE HELKVKTTDK AGNTAEAAPV TITVDTKINN MKLEFIEDKN NDGKFSWSEN LTNENPGRIA WKIDLPKDGS VKVGDELYYT VKSNYMVEQN GKLVPAWSSA PDTRRVVTQE DIDKGYMGWK ATNQDDITKK VGVFGKNASG RYVEAEAYFV DKAGNKSQVT KDKVVFDFAT TKIDGDAIWQ TNQIGIPHPH NINASNLQND IDLDRNRNFE ITAKRIVKGA HITTGDGDDV ITVVDGWGGR INNHSSVELG DGTNMLKVAR DIDKSTVTAG SGDDTVNVGN WIREHSDINL GNGNNTLTVG NIIVNSTVAT GDGNDTIKVK NAIIGSTIKL GAGDDTVEVG NKDITDNTLT GKSNIDGGDG YDKLTITNPG TTINLSNIAS QAHNFEELNI SNKSQNTTLS VKLSDVISLT DGDNTLKITA DAEDKVEFKD AGWQKGASTD GYTAYTNDTS GTTVTVEIKD EVTQPM
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