Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1682 |
Symbol | |
ID | 5595522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009795 |
Strand | + |
Start bp | 4651 |
End bp | 9810 |
Gene Length | 5160 bp |
Protein Length | 1719 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640919139 |
Product | filamentous haemagglutinin family protein |
Protein accession | YP_001456651 |
Protein GI | 157149588 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAGA ACAACCAAAT TTCAAATGCG CAAAGCAATC AAAAGCCTAG CCTTTTAACC ATAGGCTTAA ATTTCTACGT AAGTCTCTCT TTGCTACTTG CCACTTCACC AGCATTAGCA AATGAGCCAA GCATCATAGC TGACCCAGGT GCTAGCAACC GCCCTGATAT ACTAAAAGCT CCTAATGAGA CGCTAATAAT AAACATCACA AACCCTGATA GCAAGGGTGT ATCTATAAAT GAATATAGTA GGTTTAATAC CCCAACCACT GGCACTATCC TTAATAACTC TAATAAAAAC ATAGACACTA AGATAGCTGG CCAGATAGAT GCAAACTATA GGCTAAATAA AGAGGCAAGC CTTATTATAA ACAAAGTAAA TTCGGCTGAA AAATCATCTC TAAAAGGAAA TTTAGAGGTT GCTGGTAGCA GAGCTGATGT GGTCATAGCA AACCCAAATG GCATAAGCGT AGATGGTCTA AATATGATCA ACTCTCGCTC ACTTACGCTA ACAACAGGCA ATATCAATAA ACTAAGTCCT AAAGAGATAG AGCTAATATC TAATAACTCT ATTGACATCG TAGGGGACGG CCTAAACGAT AAGAGCAGTG ACTATACTAA TGTGATCTCA AATGCCATAA ATTTAAACTC AAATATCCAC GCAAATGAGC TAAACATCAT CGGTGAAAAG GCGGTTACTT CAAGCAAAGA TAGACTTTAC AACGACGTAA AAGCTAAAAA CCAAGAAAAC AGCTTTAGCC TAGATAGTAG CGCGCTTGGC GGTATGTATG CTAATAAAAT CAAACTAGTT GGCACAAGTA ACGGCGTAGG CGTAAATAAT AATGGTCTAG TTATAGCAAA TAACAACATA GAGATAAGCC TTGATGGCGA TATAGTTAAT GCTGGCGCTA TCGCTTCTAA TAAAGATACA AGCATAAAAG CAAATACTAT AGCAAACAAA GATGAAGCGC TAATAGCAGC CAAAGAGAAC CTTAACATAA AAGCAGACAC TTTGGTAAAT ACCTCTAGTC AAATTTATGC TAAAGATATA AACGTAGAGG CTAAAAAGCT AGTAAATAAC TCAAGCTCGC AGGCTAGGGT GGATACAGTG CATAAACAAG GCACTATGCA TCTAAAAAAA GAGGGTGTCA ATAGATATAA GCTTGGTGTA AATTTAAAAG AACTAAAAGA GAAAATAAGC ACCAAACTAG CTAAAAAACT AGGTAAAGAT ATAAGTGAGC TAGATGAAAA CGAGGTAAAT GAGTTAGTAT TAAAAGAGGC TATAAATAAA GATAGCGCTC TATATGCTCT AAATTTACAC AAAGACTCAT ATCTATACGG CACCAGCCAA AAGATATTTC ACAACCTAAG ACTAGACTAT GATACAAATG AAGTAGTAGT AGATACTAGT AGAGCAAAGA ATAATGAACA AAAAAGAACC ATCACATATA GCATAGTTAA AGATGTTCTA AATGAAGATG ATAAAGCTAA CTTCATCCCA GGCAGCATAA TAGCTAACAA TGATATAAAT TTAAATGTAA ATGATGTCTT AAACGATAAG AGTGTTATAT ATGCTGGAGG AGATCTAAAA CTAAATAGCG ATAATGTAGA AAACATAGCT CTAATGTTAA ATAACCACGT AAATAGCTAT AGTGTTTATA AGTGGAAAGA GAAAAAGAAA TGGTATAGAG GTGGAGGATG GAAAACTAAG GGCGGAACAG GAAAAGTTTT CAGTTTCTCA TACACAGATG TTGGCTTGCC AGCGGTATTT GCAGCGGGCA ATAACATAGT AGGAAGCACG CAGGACTTTT CAAGCTACGC ACTAAATGAT GATATAAAGC TAGCAAATGT TGATCTGGAT AAATTCTCTG AGCCAATATT TAATAGTCCA ATCATCAAAA ACCTAAATAG AAGGGTTAAA AACCAAGGGT ATTACTACAG CCTTGATAGT ATAAACTCTG CTTATATAGC AAATATTCTT GATGGCTTAT ATGAAGCAAG AAACGAGAGT ATAAGCAAAT TTAAAAAGGA AGCAAAAGAT AAAAACGTAA AAGCCTCAGC TCTAGTAATG GCTAATAACA TAGACCTAGA CGCCAAAGGC AACATAAGTC TAGCTGGTAG TGTAGTGGCT GATAGTCTAA ATTTAAATGC GGATAAAAAG ATAAAGCTAA AAGGCGCGGA GCTATCAGCT AGCGGTGATG CTAACATCGT GGCTAATGAT ATAGAGATAG ATAGTTCTGA CCTAAACTCT AAAAATTTAA ACATAAATGC AAAGAGCAAT ATAAACTTAG ATCAAAGCAA GTCTCACTTT AGCAAAGTCT CTAACCTAGA GACCACAAAT GATATAAATT TACAAGCTGG CAATGACATA AAAGTCTCTG GCTCAAATTT AGATGCGGGT GGAGATATAT ATTTAAACTC AGGCAATGAT ATAGAGATAA AAGCAGATGA GTTTAGCTAT ACTCACCACG CAAGCTCTAA AGGTATGAAA TTTGATGAGA GTGTAAAAAG AGTAAGTGCT GCAAATTTAA ACGCTAATAG CGACATAAAT TTAAATGCTA AAAACACTCT TGTAGTCTCA TCATCACATC TAAACTCGCT AAAAGATATA AATTTAAAAG CTAGCGACAT CATACTAGCA GCACAGTCAA ACAGTAGCGA AGCAACAGCT ATAAATAGCT CTAAATCGCT CCTTTCTAAA AAACAAACCA TAGATAGCGC TGTAAGCTCA GAGGTGGTAA GCACTAGCCT AAAATCAGGC AATAACATAA ATTTAAACTC AGCTAACGAT ATCTATCTAG TATCATCTAA GCTAAAATCA GACAAAGATA TAAATTTAAA CTCAAACAAC AATATCCTCT TTGAAAACGG CTACGATGTA GAGGCTAGCT CTCATGCTTC TAAAAAGAGC AAAATATCTT TAAATCCAAA TGCCTTTTAT AAGAGTAGCT TTGACCTTGT GGCAAATGGC AGCAAAAAGG CAGTTTATAG CACTATAGAC TCTGGCAGTG ATATAAATTT AAATGCCAAA AGTGCTCTTA GCCTAAAAGG TGCAAACCTA AACTCTGGCA ATGATATAAA TTTAAACGCA GAGCTTATAG CTATATCAAA CACAAATGAT GAAAGCTACC ATAAAGAGGA GCATAAGAGT AGCAGAGTAG GTATCTTAAA GCCTAATGAA GTGCTAAAAG ATATCGTTGT TGATCTAAAA AGAAAGCTAA ACCCTCTAAA AGAAGCAAAA GATAAATTTA GCTCACTTAG CACACCTACA TTTGTCATAG GAAAAACATC TACCAAATTT GAAAGCAATA ACCAAGAAGC AAAGAGCTCT AATATAAAAG CTGGCAAAAA TATAAATATC AATGCCAATA AAGATATAAA CATAGTTGCT TCAAATGTAG ATGCTAAAGA GAACTTAAAT TTAAAGGCTA ATGAAGCGGT AGAAATTTCA TCGGCAAATA GCATCTCTAA TGCCAAATCA GAATCTGTAA CAAGAAAGAT CCTTGGCAAG CAAAGCGCGT CAGCAAGCTC AACAAATGAA GAGGTTGTTA GCTCAAATTT AAACGCCAAA AACATAAACA TAGCTTCAAA CCAAGATACC ACACTCTTGG GCTCAAATAT CATCGCAGAT GAGAGCTTAG ATATAAAAGC TGATAGTATA AATTTACTAC CAGCATCATA TAGCTTAGAG AGCTCATCTA AATTTAAAGA CTCAGGCTTT GGCGATCTAA TGAAGTCAAA TGGCGAAGAG AGCAGCTCAA ACTATAACCT TGCCATAAGC ACACTATCAG CAAAAGATAT AAGTCTAAAC TCAAATACCA TAAACGCCCT AGCTTCTATC ATAGAAGCTA CTAATGTAGA TGTAAATACA AAGCTTTTAA ATTTAGTCTC AGCAAAGAGC ACATCTGTAA ATACAAGCCT AAGTAACAAC GCAGGAGTTT TAACAGCTAC TGTAAAAAAT AAAGGCAAGA TAGAAGAGGT AGAGATCCCA GCTATCATCA AGGTAAAAGA TAAATTTACA CTAAATGGCA AGGATATAAC TAATAAGCTA GATGCTACAA CATTTAAAGC GATAAATGAC TCTTTAAACT CAGAGGAATT TAAAGAGGGA GTTATAAGAG AGTTAAGATC AAACTCAGAT ACTCCAATAG ACGAAGAGAC GATAAATCAA GTAAAAGCAG TTTTAGATTC TAAAGAGTGG GAAGATAAGA CAACTACTCT TAGCGGAATG GGAGCGCTAA TAATAACAGC CATCGTTACA TTTCTAACAG CAGGAGCTGG TGGTGCGGTA GCAGCAGGTG TTCTAGGTAG TGCAGCAGCA GCTAGCTCAA CCGCAGGTTT AGCCATATCA GCTATGACAA CAGCTGTCAT AGCAAACTCA ACAGTCCAAC TAACAAACAA CCTCTTATCT CATGGTAAGG TTAAATTTGA TGCATCATCC CTAGCTAAAT CAGCCATTAG TGCAGGGGTG CTATCTTATG CTGGTGCCGC CTTGGGAACA AATGCCCTAA CACAGAATAT GGATTTTTCA GATTATGTAA AAAATGCTAC TATAAACGGA ACGCTTCAGG GCATAAGCTC TGAGATAAAT GGAGGAGAGT TTAAAAAGGG CTTTTTAACG GGTGTTGCGC TATCTATTAT GAGCGATGCT TCCCTTCAGA TGAGAAAGCA TGTAAAGGAA AATTATAATT ATGCTGGTAA AAATGGAGAA ATAGTGCCAG ATGATACACA AAGTGTTGGT GTAAGAGGAG ATGGTGTTAA AATAGGAGGT AGTCACTTTG AAAAAATTTA TAATAATGGA ATACTCGAAA AGAAACCAAT AGTTGCACCT ACTGGTGGTT CACAAACAGG AGCTAGGATG TTGTTTGGAA AAAGCTATGA AAAAGGTTCT TTGGCAGACC ATGCTATAGA ACACTTTGCA GGACCACATG ACTTTATGTC TAGCTGGAAC TATGAAAATA TAAATGGAAT CACATATCTA AAAGATAATG GAAGCTTGGT AAATATAGCA AGTGGTTTGC TTTTAGTTCC TGCCGCACCA TTTGCAGCAG CACCATTTAT CCAAGGACAT TTGTCAGATA TACAAATTTA TAAAGATGTA AAAAAAGTAA GCAAAGATGC CAGAAGAGAA GTTTTAAACA AAGCGAAAGA GAACAGATGA
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Protein sequence | MLKNNQISNA QSNQKPSLLT IGLNFYVSLS LLLATSPALA NEPSIIADPG ASNRPDILKA PNETLIINIT NPDSKGVSIN EYSRFNTPTT GTILNNSNKN IDTKIAGQID ANYRLNKEAS LIINKVNSAE KSSLKGNLEV AGSRADVVIA NPNGISVDGL NMINSRSLTL TTGNINKLSP KEIELISNNS IDIVGDGLND KSSDYTNVIS NAINLNSNIH ANELNIIGEK AVTSSKDRLY NDVKAKNQEN SFSLDSSALG GMYANKIKLV GTSNGVGVNN NGLVIANNNI EISLDGDIVN AGAIASNKDT SIKANTIANK DEALIAAKEN LNIKADTLVN TSSQIYAKDI NVEAKKLVNN SSSQARVDTV HKQGTMHLKK EGVNRYKLGV NLKELKEKIS TKLAKKLGKD ISELDENEVN ELVLKEAINK DSALYALNLH KDSYLYGTSQ KIFHNLRLDY DTNEVVVDTS RAKNNEQKRT ITYSIVKDVL NEDDKANFIP GSIIANNDIN LNVNDVLNDK SVIYAGGDLK LNSDNVENIA LMLNNHVNSY SVYKWKEKKK WYRGGGWKTK GGTGKVFSFS YTDVGLPAVF AAGNNIVGST QDFSSYALND DIKLANVDLD KFSEPIFNSP IIKNLNRRVK NQGYYYSLDS INSAYIANIL DGLYEARNES ISKFKKEAKD KNVKASALVM ANNIDLDAKG NISLAGSVVA DSLNLNADKK IKLKGAELSA SGDANIVAND IEIDSSDLNS KNLNINAKSN INLDQSKSHF SKVSNLETTN DINLQAGNDI KVSGSNLDAG GDIYLNSGND IEIKADEFSY THHASSKGMK FDESVKRVSA ANLNANSDIN LNAKNTLVVS SSHLNSLKDI NLKASDIILA AQSNSSEATA INSSKSLLSK KQTIDSAVSS EVVSTSLKSG NNINLNSAND IYLVSSKLKS DKDINLNSNN NILFENGYDV EASSHASKKS KISLNPNAFY KSSFDLVANG SKKAVYSTID SGSDINLNAK SALSLKGANL NSGNDINLNA ELIAISNTND ESYHKEEHKS SRVGILKPNE VLKDIVVDLK RKLNPLKEAK DKFSSLSTPT FVIGKTSTKF ESNNQEAKSS NIKAGKNINI NANKDINIVA SNVDAKENLN LKANEAVEIS SANSISNAKS ESVTRKILGK QSASASSTNE EVVSSNLNAK NINIASNQDT TLLGSNIIAD ESLDIKADSI NLLPASYSLE SSSKFKDSGF GDLMKSNGEE SSSNYNLAIS TLSAKDISLN SNTINALASI IEATNVDVNT KLLNLVSAKS TSVNTSLSNN AGVLTATVKN KGKIEEVEIP AIIKVKDKFT LNGKDITNKL DATTFKAIND SLNSEEFKEG VIRELRSNSD TPIDEETINQ VKAVLDSKEW EDKTTTLSGM GALIITAIVT FLTAGAGGAV AAGVLGSAAA ASSTAGLAIS AMTTAVIANS TVQLTNNLLS HGKVKFDASS LAKSAISAGV LSYAGAALGT NALTQNMDFS DYVKNATING TLQGISSEIN GGEFKKGFLT GVALSIMSDA SLQMRKHVKE NYNYAGKNGE IVPDDTQSVG VRGDGVKIGG SHFEKIYNNG ILEKKPIVAP TGGSQTGARM LFGKSYEKGS LADHAIEHFA GPHDFMSSWN YENINGITYL KDNGSLVNIA SGLLLVPAAP FAAAPFIQGH LSDIQIYKDV KKVSKDARRE VLNKAKENR
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