Gene CCC13826_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1507 
Symbol 
ID5597555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp488809 
End bp490197 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content42% 
IMG OID640929078 
Producttrap dicarboxylate transporter, dctm subunit 
Protein accessionYP_001466386 
Protein GI157164192 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component 
TIGRFAM ID[TIGR00786] TRAP transporter, DctM subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTT TGATAATGTT TATAGCTGCA CTATTGATGC TTGGCATTGG CTTTCCAGTG 
GCATTTACCT TTGGCGCGGT TGCGATGATA TTTGGCATGG TTGGCAGCGT CGTAGAGAGC
CTTAGCGATG GCGATGGACT ACTTGGCAGT ATAGAAGTGT TTAAAGATAT GTTTAACTTC
ATGCCATATA GGATTTTCTC TATCATGGAG AGTAGAATTT TCATAGCAGT TCCGCTTTTT
GTATTTATGG GTGTTGTGCT TCAAAAGTCA AAGCTAGCTG AGAGGCTACT TGAGAGCATG
GGTATGCTTT TTGGCGAAAT TCGTGGTGGT ATCGCTATTA GCACTATCTT GGTTGGCGCA
CTTTTGGCCG CTTCAACTGG TGTGGTTGGC GCTAGCGTTG TTGCTATGGG AGTTATAAGC
CTACCAGTTA TGCTAAAGTA CAAATACGAC CAAGCTCTAG GCTGTGGCAC TATATGCGCT
GCTGGCACTC TTGGACAGAT CATCCCACCA TCTATCGTGC TCATCATCTT GGGCGACATC
TTTTCAGTGC CAGTTGGCGA GCTTTTTCAC CAAGCTGTTG TGCCAGGACT TACGCTAGTT
GGTGTTTATA TAGTTTATAT TTTGATAGTT GCTTATCTTA AACCAGAGGT AGCTCCTATC
GTAAAAGATG AGAGTGGTGT TAGTAAATTT AAGCAGATCA TTAGAGCGCT AACTGCGATC
TTCCCTCCAC TTTTGCTAGT TATTTGTGTG CTTGGCTCTA TCTTTGCAGG TATCACTACG
CCGACTGAAA GTTCAGCATT TGGCTGCGTG GGCGCTATCA TTCTCGCTAT GTTTTATAGG
ACATTTTCAT TTTCTATGAT GAAAGAGGCT TTGGCTGAGA GCGTGAAAAC TACAGCTTTA
GTCTTTGCCA TACTTGTTGG TGCGACTGCC TTTTCTATGG TCTTTAGCTA CACTGGAGGC
GATGAGATAG TTGAAAATTT CATGACAAAT TTACCAGGCG AGAAGTGGGG CTTTATCATC
TTTAGTATGG CTGTTATCTT TGTGCTCGGC TTTTTTATCG ATTTTGTTGA AATTTCATAT
ATCGTGCTTC CTATCTTGGT GCCAATAGCC GCAAAACTTG GCATAAACCC AGTCTATCTA
GCGATCTTGG TTGCTATGAA TTTACAAACT TCATTCTTGA CACCGCCATT TGGATTTAGT
CTATTTTTCT TAAGATCAGT CGCACCTGCT GAGATAAAAA CAGCTGCTAT TTATAAAGGC
GTGGTGCCTT ACATCATCAT CCAAGTGGCA GTTTTAGTCT TTTTCTGCGT CTTTTTGATG
GAGATAAAGC CGATGCTAGA TGCGAGCCAC GGCGGATTAT TTAACTTCTT ACTCTCACTT
TTTAAATGA
 
Protein sequence
MAGLIMFIAA LLMLGIGFPV AFTFGAVAMI FGMVGSVVES LSDGDGLLGS IEVFKDMFNF 
MPYRIFSIME SRIFIAVPLF VFMGVVLQKS KLAERLLESM GMLFGEIRGG IAISTILVGA
LLAASTGVVG ASVVAMGVIS LPVMLKYKYD QALGCGTICA AGTLGQIIPP SIVLIILGDI
FSVPVGELFH QAVVPGLTLV GVYIVYILIV AYLKPEVAPI VKDESGVSKF KQIIRALTAI
FPPLLLVICV LGSIFAGITT PTESSAFGCV GAIILAMFYR TFSFSMMKEA LAESVKTTAL
VFAILVGATA FSMVFSYTGG DEIVENFMTN LPGEKWGFII FSMAVIFVLG FFIDFVEISY
IVLPILVPIA AKLGINPVYL AILVAMNLQT SFLTPPFGFS LFFLRSVAPA EIKTAAIYKG
VVPYIIIQVA VLVFFCVFLM EIKPMLDASH GGLFNFLLSL FK