Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1507 |
Symbol | |
ID | 5597555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 488809 |
End bp | 490197 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640929078 |
Product | trap dicarboxylate transporter, dctm subunit |
Protein accession | YP_001466386 |
Protein GI | 157164192 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGTT TGATAATGTT TATAGCTGCA CTATTGATGC TTGGCATTGG CTTTCCAGTG GCATTTACCT TTGGCGCGGT TGCGATGATA TTTGGCATGG TTGGCAGCGT CGTAGAGAGC CTTAGCGATG GCGATGGACT ACTTGGCAGT ATAGAAGTGT TTAAAGATAT GTTTAACTTC ATGCCATATA GGATTTTCTC TATCATGGAG AGTAGAATTT TCATAGCAGT TCCGCTTTTT GTATTTATGG GTGTTGTGCT TCAAAAGTCA AAGCTAGCTG AGAGGCTACT TGAGAGCATG GGTATGCTTT TTGGCGAAAT TCGTGGTGGT ATCGCTATTA GCACTATCTT GGTTGGCGCA CTTTTGGCCG CTTCAACTGG TGTGGTTGGC GCTAGCGTTG TTGCTATGGG AGTTATAAGC CTACCAGTTA TGCTAAAGTA CAAATACGAC CAAGCTCTAG GCTGTGGCAC TATATGCGCT GCTGGCACTC TTGGACAGAT CATCCCACCA TCTATCGTGC TCATCATCTT GGGCGACATC TTTTCAGTGC CAGTTGGCGA GCTTTTTCAC CAAGCTGTTG TGCCAGGACT TACGCTAGTT GGTGTTTATA TAGTTTATAT TTTGATAGTT GCTTATCTTA AACCAGAGGT AGCTCCTATC GTAAAAGATG AGAGTGGTGT TAGTAAATTT AAGCAGATCA TTAGAGCGCT AACTGCGATC TTCCCTCCAC TTTTGCTAGT TATTTGTGTG CTTGGCTCTA TCTTTGCAGG TATCACTACG CCGACTGAAA GTTCAGCATT TGGCTGCGTG GGCGCTATCA TTCTCGCTAT GTTTTATAGG ACATTTTCAT TTTCTATGAT GAAAGAGGCT TTGGCTGAGA GCGTGAAAAC TACAGCTTTA GTCTTTGCCA TACTTGTTGG TGCGACTGCC TTTTCTATGG TCTTTAGCTA CACTGGAGGC GATGAGATAG TTGAAAATTT CATGACAAAT TTACCAGGCG AGAAGTGGGG CTTTATCATC TTTAGTATGG CTGTTATCTT TGTGCTCGGC TTTTTTATCG ATTTTGTTGA AATTTCATAT ATCGTGCTTC CTATCTTGGT GCCAATAGCC GCAAAACTTG GCATAAACCC AGTCTATCTA GCGATCTTGG TTGCTATGAA TTTACAAACT TCATTCTTGA CACCGCCATT TGGATTTAGT CTATTTTTCT TAAGATCAGT CGCACCTGCT GAGATAAAAA CAGCTGCTAT TTATAAAGGC GTGGTGCCTT ACATCATCAT CCAAGTGGCA GTTTTAGTCT TTTTCTGCGT CTTTTTGATG GAGATAAAGC CGATGCTAGA TGCGAGCCAC GGCGGATTAT TTAACTTCTT ACTCTCACTT TTTAAATGA
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Protein sequence | MAGLIMFIAA LLMLGIGFPV AFTFGAVAMI FGMVGSVVES LSDGDGLLGS IEVFKDMFNF MPYRIFSIME SRIFIAVPLF VFMGVVLQKS KLAERLLESM GMLFGEIRGG IAISTILVGA LLAASTGVVG ASVVAMGVIS LPVMLKYKYD QALGCGTICA AGTLGQIIPP SIVLIILGDI FSVPVGELFH QAVVPGLTLV GVYIVYILIV AYLKPEVAPI VKDESGVSKF KQIIRALTAI FPPLLLVICV LGSIFAGITT PTESSAFGCV GAIILAMFYR TFSFSMMKEA LAESVKTTAL VFAILVGATA FSMVFSYTGG DEIVENFMTN LPGEKWGFII FSMAVIFVLG FFIDFVEISY IVLPILVPIA AKLGINPVYL AILVAMNLQT SFLTPPFGFS LFFLRSVAPA EIKTAAIYKG VVPYIIIQVA VLVFFCVFLM EIKPMLDASH GGLFNFLLSL FK
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