| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1422 |
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| Symbol | cas |
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| ID | 5596213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1143474 |
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| End bp | 1145675 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640929694 |
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| Product | CRISPR-associated helicase Cas3 domain-containing protein |
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| Protein accession | YP_001466976 |
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| Protein GI | 157164437 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0408027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGT CTATTTTATT TGACGAGTTT TGGTCACATC CAAATAAACT TTTAGAAAAT
CATATAAAAA ATATGATCTC GCCTAACGAT GATGAGCTGG GTAAGCAGGT CAAGCTCTAT
CACGACATCG CAAAACTGAA AAATAATTTT CAAATTTACA TCAGAGATAC TTCAAACGAT
AAGCTGGATA AAAACCACTC GCTTTTGTCG GCATATTTTT TCTTGCTAAA CTCAAAATTT
GATGAGATAC CAACCCTATT TGGCTTTCTT GCCATCGTTT CGCACCATGG CAACGTGGTA
AATTTAATGA CACTAGCCAG AGAAGCTAAT AAATTTTTCA AAAACCAAAA AGAGCTAGGG
CAGTGGGATG AAGTGGCTGG CGCTGCTAGA AATATCAAGA TCTATTCGGG ATTATCTACA
AAAAAAGATG AGCTTTTAGA TAGAGCTGAA AAGCTTCGTC AATACTTAGT TTTATCGCAG
TACAGGCACA AATTTACCTA TGAGGACTTT ATAAATTTCA AAAGCCTATA TTCAAATTTG
ATTTATAGCG ATAAATTTGA AGCTATCTTT GGCATACCAA AACAAGAAAG TAAAGATATA
CCACCGATAG ATGTTTTAGA GAGTGATATC CAAAATTTGC CGCCAAATAA AAAGCGAGAT
ACATTTAGAA AATTTGTTTT AAATAACTTT GACGAAAACT ACAAACTTTT TACTTTGACT
GTGCCTACGG GCTACGGCAA GACCTTGACG GCATTAAATT TTGCATTGAA ATTTAACAAA
TCTCGCATAA TTTATGCGCT TCCATTTACT TCGATAATCG ATCAAACCTA CGATATAGTC
GCAAAAATTT ATAAAAATAG CGATATTTTA GTCAGCAAGG CTCACCACAA AACAACGATA
GATGAAGAAA ATCTAACCGA CGAAGACAGA TACTCAAAGA TCAAATTTCT AATGGAATCT
TTTAGCGGCG AGATAAACGT AACTACGCTT TATCAGCTGA TATTTGCGTT ATTTGGTAAC
AAAAACAAAG ATAACGTTAA ATTTAATCAG CTAAAAAATA GCGTCGTTAT CATCGATGAG
GCGCAAGCGA TCCCATATAA CTTTAGAAAA GATTTTATCC TGCTTTGCGA GATCATTTCG
CAGAGGCTTG GCACTATTTT TATATTTATG TCGGCGACGA TGCCGGTTAT CAAAAGCGAA
AATTTTAAAG AAATTTCAAA TTTAGACTAT TTTTCAAAGC AGGACAGATA CGTCATAAAA
TGGCTTGATA TAGGTGGCGA AGATGAGCTT TTAGAAAAGA TTTGCGAGGC TGCAAGCGAT
AAAAATACTC TAGTCGTCGT AAATACGATC AAAAAAGCGC AAGAACTTTT TACAAAGCTA
AGGGATAAAT TTAGCTGCTT TTGCCTAAAC GGATATATGT ATGATGATCA CAAGCGTGCT
ACTATCGAGG CTGTAAGGTG CGCGATAGAT AAAAGCAAAG TTGATCCGCT CGCAAGCAAA
ATTTTACTTA TCTCCACGCA GTCCATAGAA GCTGGCGTGG ATCTTGACTT TGACATTGGG
TTTCGCGAAG TTGCGCCTAT TAGCTCTATC ATACAGACTG CAGGACGCGT AAATAGGCAT
TTTGGAGCAA CAAGGGGCGA GCTATACGTC TTTCCTGAAA TAAGTAAATT TACAAATTTG
ATTTACGGCG ATCTATATAA AGTAAGCGGG GCTATTTTGA GCGATCTTAA GCAAAAAGAG
GTGCGAGAGA GCGAAATTTT AGAAATTTCA AATTTGTATT TTCAAAAGAT AAGCAATCAA
CTAGAAAATT TGCATATAAA AAGCGAGATA GAAAAGCTGG AATTTGAAAA TATAAATCAA
AAAATCGAGG ATATCATGAA CGATAACTAC AAACAAACCA TAATAATCGA GCCTGAAGAA
AATTTCATTA AAGATTTTGA AGCTAGAATT TTTGAGATCA AAAATAGTCC GAATGAGAAA
TTTACCATAA GAGATCTTTT TAAAAACCAG ATCAGAAAGT TGTCGAAATT TAGCATAAAC
GTAGCGTTAA AAGATATGAA TAAGCTAATG CCAAATTTAA AACAGATAAA TGGGCTTAAA
GATATGTTTT ATCTGCCGTT TGGCTCGTCT TATTTTTATA GTGCCGAGTG TGGCCTTAAA
AAAGATACGA ATTTGGATAT TGAGGACGAG GTATTTGACT AA
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| Protein sequence | MKESILFDEF WSHPNKLLEN HIKNMISPND DELGKQVKLY HDIAKLKNNF QIYIRDTSND
KLDKNHSLLS AYFFLLNSKF DEIPTLFGFL AIVSHHGNVV NLMTLAREAN KFFKNQKELG
QWDEVAGAAR NIKIYSGLST KKDELLDRAE KLRQYLVLSQ YRHKFTYEDF INFKSLYSNL
IYSDKFEAIF GIPKQESKDI PPIDVLESDI QNLPPNKKRD TFRKFVLNNF DENYKLFTLT
VPTGYGKTLT ALNFALKFNK SRIIYALPFT SIIDQTYDIV AKIYKNSDIL VSKAHHKTTI
DEENLTDEDR YSKIKFLMES FSGEINVTTL YQLIFALFGN KNKDNVKFNQ LKNSVVIIDE
AQAIPYNFRK DFILLCEIIS QRLGTIFIFM SATMPVIKSE NFKEISNLDY FSKQDRYVIK
WLDIGGEDEL LEKICEAASD KNTLVVVNTI KKAQELFTKL RDKFSCFCLN GYMYDDHKRA
TIEAVRCAID KSKVDPLASK ILLISTQSIE AGVDLDFDIG FREVAPISSI IQTAGRVNRH
FGATRGELYV FPEISKFTNL IYGDLYKVSG AILSDLKQKE VRESEILEIS NLYFQKISNQ
LENLHIKSEI EKLEFENINQ KIEDIMNDNY KQTIIIEPEE NFIKDFEARI FEIKNSPNEK
FTIRDLFKNQ IRKLSKFSIN VALKDMNKLM PNLKQINGLK DMFYLPFGSS YFYSAECGLK
KDTNLDIEDE VFD
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