Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1404 |
Symbol | trmA |
ID | 5596781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1123236 |
End bp | 1124339 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640929675 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_001466961 |
Protein GI | 157165225 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.420392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACTGCA AATACCTAAA AGAGTGCGGA TCATGCACTC TTTTTACCTC TTATAGTGAG CAAATTTCAT TTAAAACTGA TCTTATTAAG CAAAATTTCT CCCACTTTTA TGATGGTAAA TTTGATCTGT TTAGCTCAAG CCCAAAGCAC TACCGCACGA GGGCCGAGTT TGGCATCTGG CATGAGGGTA GCAAGCTTAG CTACACGATG CACGCAAGCG AAAAGGGCAA AAAGGTCTTC ATAGATGAGT GCCCAAAGGT TTGCGAGCAA ATTTCACATC TCATGCCAAG GCTACTTGAG AGCTTGCAAG ATGATGAAAT TTTACGCACA AAGCTCTTTG GAGTGGAGTT TATCGCCTGT AAAAGCGGCA CCTTAGTCAC GCTTCTTTAT CACAAAAAGC TTGATAGTGA GTTTGAAGCG GCGATGAAAA TTCTAGCTAG CAAGCTTGAT GTGATGATCT TAGCTAGATC TCGCGGTCAA AAGCTGCTAA GTGGCGAGCT AAATTTAGTT GATGAGCTAA ATGTTGATGG GCAAATTTAT AAATTTAGCC TAAGTGAAAA TGCCTTTATC CAGCCAAATA AAGCGGTAAA TGAGAAGATG ATAGCTTGGG CAAAAGAGTG CGTGCAAAGT GGCGCTGACC TACTGGAGCT CTACTGCGGA CATGGAAATT TTACCATCCC GCTTTCGTTT AAATTTAAAA ACGTCCTTGC CACTGAAATT TCAAAAAGCT CGATCGCAAA TGCCCTTAAA AACTGCGAGC TAAATGGGGT AGAAAATATC AAATTTTTAC GCATGGACGC TGATGAGCTG ATGAGCGCAT TTGCTGGCGT TAGGGAATTT AATAGGCTAA AAGATATAAA ATTAAGCGAC TTTAACTTCT CGCACGTCCT TGTCGATCCG CCTCGCGCAG GACTTAGTGA AAGCGTCATA AATTTCATTA GAAATTTCAA AAATATCATC TACATCTCGT GCAACCCAGA GACATTAAAA GAAAATCTAA ATGAGCTTAC TAAAAGCCAT AAAGTGATAA AATTTGCGCT CTTTGATCAG TTTGCCAACA CTCATCACAT CGAGTGTGGC GTGCTACTAG AGGCAAAAAG ATAA
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Protein sequence | MDCKYLKECG SCTLFTSYSE QISFKTDLIK QNFSHFYDGK FDLFSSSPKH YRTRAEFGIW HEGSKLSYTM HASEKGKKVF IDECPKVCEQ ISHLMPRLLE SLQDDEILRT KLFGVEFIAC KSGTLVTLLY HKKLDSEFEA AMKILASKLD VMILARSRGQ KLLSGELNLV DELNVDGQIY KFSLSENAFI QPNKAVNEKM IAWAKECVQS GADLLELYCG HGNFTIPLSF KFKNVLATEI SKSSIANALK NCELNGVENI KFLRMDADEL MSAFAGVREF NRLKDIKLSD FNFSHVLVDP PRAGLSESVI NFIRNFKNII YISCNPETLK ENLNELTKSH KVIKFALFDQ FANTHHIECG VLLEAKR
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