| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1306 |
|---|
| Symbol | |
|---|
| ID | 5597237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1088099 |
|---|
| End bp | 1089439 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640929635 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466921 |
|---|
| Protein GI | 157165258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00236865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGG TGATATCTGC TCTAATCGTA GTTATCGTGA TCGTTGCAGG CGCTGTTTAT
TTCGCCTCAA ACAAGGTCGA GGAGAACTAT CAAAGGATAG TTGATAGACT AAATGATGTG
AATGGCTTTA AAGTTTCAGA AAATAGCTAT CAAAAAGGCT TTTTTGGCTC AAAAGGATCG
TTTGATCTTA TCGTTTCAAA AGATCTTTTG AAAAATTTAG CCGGCAAAGA TGTAGATGAG
GATCTAAATT TCAAGGTAGA AAATGAAATT TCTCACTCAG TGCTTGCATT TGTAAATGGC
TTTGATATTG ACTCAAAAAT TTCTATACAA AATGAGGCGA TAAAAAATAT CGTAGCTTCA
TTTCTTGGGT CAAACGTCGT CGCAACGGCT AAAACAAAGG CTAGCGTGAG TGGTGATAAA
GACGTAAATG TTAAATTTAG TGATATTGAC TTTAGTGACA AGCAAACTAT GAATGTTCAT
ACAAAGGATG TGAAATTTGG TTTAAAACTG GACGCAAAAG ATAATGTAAA TAGCGCAAAC
TTGGGTCTTA AGAAAGTTTC ATTAAAAGAC CTTAATGAAG AAAATAAAGC AGAAGTTAAT
CTTGAAGGCG TCGATATAGA TACAAGCTAC ACTGTGCCAG TTGAAATTTC AAAGATATTT
GAGAGCAAAC TAGCTCCTTA CGTAGCAAAA GCTAAGATTA AAAAACTAGC ATTATTAGAT
GAAAAAGATG GTAATGTTGC TTTAGACGAT CTTGAGTATA GCTCGAAATT TGAAGTCTCA
AATGATCTTG GTAGCTCAAA TGACGTGGTG AAGATAGGTG CAGTTGCTGT TAATAAAGTG
AAATTTACAG ATTTTATCTT AGATAGCAAA ATAGCAAATA TCAACGTGCC AACTATAAAT
AATATACTTG ATAGACTAAG TAATGTAAAT GTTGATACAA ATGAGAGTAT CTTTGCTGGG
TTAAATTTGG ACGAAGTAAT AGGTCAAATT TTAGAGAAAA ATCCAAGTGT GAAAGTGGAT
ACATTAAGCT TTAAAAATGG CAATAATGCG ATAAATTTAA AATTAGATGC TGCTATCAAT
GGCTTTAAAA GCGGAGAAAG TCAGCTTGCG ATCTTTGATA AGCTATCACT TAATGGCGAG
CTAAGTGTGG ATGAGACTTT GGCTAAATTT TTTGATACAC TTCTCCCAGA GATGACTCTT
ATCGAGCCAA CACTTATATC TGCTGGATAT TTAAAAGAAG ATGGCAAAAA AGTAGTAAGT
AAATTTAAGT ACGATCCAAA TAAAAAAGAT ATTATTTTTA ATGAAAAGGT TGGACTTCAA
AATTTATTTA TGGGCTTTTA A
|
|---|
| Protein sequence | MKKVISALIV VIVIVAGAVY FASNKVEENY QRIVDRLNDV NGFKVSENSY QKGFFGSKGS
FDLIVSKDLL KNLAGKDVDE DLNFKVENEI SHSVLAFVNG FDIDSKISIQ NEAIKNIVAS
FLGSNVVATA KTKASVSGDK DVNVKFSDID FSDKQTMNVH TKDVKFGLKL DAKDNVNSAN
LGLKKVSLKD LNEENKAEVN LEGVDIDTSY TVPVEISKIF ESKLAPYVAK AKIKKLALLD
EKDGNVALDD LEYSSKFEVS NDLGSSNDVV KIGAVAVNKV KFTDFILDSK IANINVPTIN
NILDRLSNVN VDTNESIFAG LNLDEVIGQI LEKNPSVKVD TLSFKNGNNA INLKLDAAIN
GFKSGESQLA IFDKLSLNGE LSVDETLAKF FDTLLPEMTL IEPTLISAGY LKEDGKKVVS
KFKYDPNKKD IIFNEKVGLQ NLFMGF
|
|---|
| |