Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1296 |
Symbol | tyrS |
ID | 5596263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 472607 |
End bp | 473977 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929063 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001466372 |
Protein GI | 157164338 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000911619 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAGAC GTGGAATAGG CGGTTTTGGT ATTGTTGTAG TTTTACTTGT TTTGATATTA GCTGGTGGCT TTGGATATGC TTTGATGTCG AAAGACTTTG AGCGAAATGA GCCAATTATC GGCGTTGCTG ATAAGGTTTA TTGGAACCTT CGCTCGCCTA TGAATATCAA ATTTAAAGAT GACAGCGGCA TAAAATTTGT GCGCATTAGC ATAAATGACG GCAAAAATGA CCTAAATTTA CTAAATCAAA TCATACAAAA TCCAAGCACT GAGCTTGATG TAAATTTAAC CTTCCCAAAG ACTGGATTTT TTGCTCAAAA AGACACTTAT GAAATGAGCA TAGAAGCGGT CGATACTAGC AAATGGGGCT TTTTTACTGG CAATAAAGCA AGCAAAAAAG TTGAGGTTGT GCTCGACACC TCAAAGCCTG ATCTTTACGT GCTTTCTCAG TCTTACTCTA TCTCAAAAGG CGGCAGCGCT GTTGTCGTCT TTAGAGCGAC TGATAATCAG CTAAAAGAGG TTTATGTCCA GACAAATTTT GGTAAGAAAT TTAAGGCTGT GCCATTTTAC AAAGAGGGCT TTTATGCAGC ACTTGTTGCT TGGCCAGTGC AGGTTGAAAA CTTTAGCGCT GAGGTCATCG CAAGAGACTT TGCGGGCAAT GAGAGCAAAT CTCACGTGAG ATATTTTTAT GAAAATGTAA AATACAAAAC TTCAACCATT GCTTTAAATG ATAGATTTTT AGACGGAAAG ATCGTTGATC TAACAGATCA ATACGCCAAA GATCCAAACG CTCTTTCAAG GCTTGAGAAG ATGAAATTTG TCAATGAAAC ACTAAGAAAT TCAAACGAAG AGAAGATAAC AGCACTTACT TCAAACGTCG ATACTGACAT CACAAATGGC TTTAATATCA TCCCATTTTA CCCGCTTAGA AATGGCAAGA AAGTAGCTGA TTTTGCCGAC CACCGCTTCT ATACATATAA TAACGAGCAA GTAAGTGAGT CATGGCACAT GGGTATTGAT TTTGCAAGCG TGGCATCAGC TCCGATAATA GCCAGCAATG CAGGTCGCGT TGTGCTAGCA TCTGAGAATG GAATTTATGG TTTAAACATT GTGATCGATC ATGGATTTGG ACTTTACTCA CTTTATGGTC ACTGCTCAAG TGCGAAGGTA AAAGAGGGCG ACATGGTAGC TGCTGGCGAT CAAATAGGCA CAACTGGAAC GAGCGGTCTT GCGCTTGGAG ATCACCTTCA CTTTGGAATT TTAGTCCAAG GCGAAGAGGT AAGGCCTCAA CAATGGATGG ATAAAAAGTG GATAAAAGAC AATGTGACAA GTGTCTTAGA TGCCGCAAAG GCGATGATAG ATAAGAATTA A
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Protein sequence | MYRRGIGGFG IVVVLLVLIL AGGFGYALMS KDFERNEPII GVADKVYWNL RSPMNIKFKD DSGIKFVRIS INDGKNDLNL LNQIIQNPST ELDVNLTFPK TGFFAQKDTY EMSIEAVDTS KWGFFTGNKA SKKVEVVLDT SKPDLYVLSQ SYSISKGGSA VVVFRATDNQ LKEVYVQTNF GKKFKAVPFY KEGFYAALVA WPVQVENFSA EVIARDFAGN ESKSHVRYFY ENVKYKTSTI ALNDRFLDGK IVDLTDQYAK DPNALSRLEK MKFVNETLRN SNEEKITALT SNVDTDITNG FNIIPFYPLR NGKKVADFAD HRFYTYNNEQ VSESWHMGID FASVASAPII ASNAGRVVLA SENGIYGLNI VIDHGFGLYS LYGHCSSAKV KEGDMVAAGD QIGTTGTSGL ALGDHLHFGI LVQGEEVRPQ QWMDKKWIKD NVTSVLDAAK AMIDKN
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