Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1288 |
Symbol | htrA |
ID | 5596868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1027600 |
End bp | 1028439 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640929583 |
Product | serine protease |
Protein accession | YP_001466874 |
Protein GI | 157164270 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00462648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGGGC TGGTTGATTA TCAAGCGATT TTGGAGCGAG TGTTTTTGTC TACTTTGCAA AAGGTAAAGG GCAAAGACGG TGGTGTAAAT TGGGACGATG TCGCAAATAT GTATAACGAG ATGACGCGTA TGGAGGCAGC TTCTACGCTG AATTTACTCT CAAATTTGCC TATCACAAAA GATGATAGCG TGCTTGATGT GGGGTGTGGC CCAGCAAGGC TTAGCGTGCC ACTTTCAAAG CTAGCAAAGA GCGTTAGCGC GCTAGATCCG TTTGCTAAAA TGCTTGAATA CGCTAAAAAA AATGCAAAAG AGGCTGGAGC GAAAAATATA AATTTCATCC AAAAAGACTG GAGAGATGAG ACGAGCATAA AGGACTTGCC AAAGCATGAC ATCGTGCTAG CATCACGCTC GGTTGGGCTT TTTGATATAA AAAAGCTTTG CAAATTTGCT AAAAAATATG TCGTGATGAC CTCGTTTTTG CCAGATCATC CAAGCCTAAA AGATATCTGG CAAGACTTCT TAAAAGGGAT AAAAGATGAA AAAGAGGCAG CTCTTAGCGA CAGAAGATTT GGCTACAACT TTATCTTTAA TATCGCCTAC GACATGGGGG CAAATCCAAA TTTAAAGATA ATCGACACCA TTTATGAGAG GGACTTTACT AGCCTTGAAG AGGCGTTTTC TTATTTTAGA TTTGTCGGTG AGATCGCGCC CCAAAAAGAA GAAATTTACA AAGAAAATGT AAAAAGCTAC CTCACAAAGA CCAAAAGTGG CTTTAAATTT AAAAGAGAAA CGAAGAGTTA TCTTATCTGG TGGGACGTGC GGGAGATGAA ATTTGAGTAG
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Protein sequence | MQGLVDYQAI LERVFLSTLQ KVKGKDGGVN WDDVANMYNE MTRMEAASTL NLLSNLPITK DDSVLDVGCG PARLSVPLSK LAKSVSALDP FAKMLEYAKK NAKEAGAKNI NFIQKDWRDE TSIKDLPKHD IVLASRSVGL FDIKKLCKFA KKYVVMTSFL PDHPSLKDIW QDFLKGIKDE KEAALSDRRF GYNFIFNIAY DMGANPNLKI IDTIYERDFT SLEEAFSYFR FVGEIAPQKE EIYKENVKSY LTKTKSGFKF KRETKSYLIW WDVREMKFE
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