| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1268 |
|---|
| Symbol | flgA |
|---|
| ID | 5596135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1005328 |
|---|
| End bp | 1006134 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640929564 |
|---|
| Product | flagellar basal body P-ring biosynthesis protein FlgA |
|---|
| Protein accession | YP_001466855 |
|---|
| Protein GI | 157165005 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.286326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTGTG TCGTAAATGA TCAAATTTCA CTCAGTACTT TTGGCTTTGA GGGCGAAGAT
AATGAAATTT TAAACTTAGA GGGCAAAAGA GCAGCCAAGA TAGAGAGTAA AAAACTCTAT
GAAATTCTAA CAGCAAATTT TAAAACATAT AATGACAAAA GCGGCGGTAG CGTGGCTTTT
GTGAAAAACT GCTCTATCAT GGATGAAATT CAGATGCAAT TTCTAAGAGA GATCAGCAAC
GAGTATCCAG GCATCAGCGT GAGCGATCTT AGCATCAGCC CGCAAAACAA ACTCCCTGCA
AATTTTAAAG ACTTAGTCTT TAAAAATATC TTCTTAAACG ATCAAAATAG CCAAAAAGGC
GTTTTTAGAG CCTCATTTGA GGATGTTGAT CTAAGCCTTA AAAGCCTTTA CTTTAAATTT
AGCTTTAACG CCAAAATGCC AGTTTTTATC GCTATAAATT CTATGAATAC AAACCACATT
TTAAGCCTGC TTGATTATCA ACCAACGATG ATAGAGTTTA GCAAATGGCC ACGTGACGCG
CTTTTTGGAC TTAGTGCCTC AACACTTGTC ACAAAAGTGC AGATAAGAAG CGGAGAAATT
TTAACCAAAC GCCAGTTTAA CGCCATAAGC TTAGTAAAAA AAGGTCAAAT ACTAAATGCA
GTCTTAAGCG AGGGTGGCGT CAAGATAATC GCCGAGGTAA AGGCGCTTGA AGATGGAAAT
TTAGGCGATA TGATAAAGAT AAGAACAAGA GAAAATAAAA TTTTACAGGC CACAGTTTCA
GGTAAAGATG AGGCAGTTAT AAGATGA
|
|---|
| Protein sequence | MYCVVNDQIS LSTFGFEGED NEILNLEGKR AAKIESKKLY EILTANFKTY NDKSGGSVAF
VKNCSIMDEI QMQFLREISN EYPGISVSDL SISPQNKLPA NFKDLVFKNI FLNDQNSQKG
VFRASFEDVD LSLKSLYFKF SFNAKMPVFI AINSMNTNHI LSLLDYQPTM IEFSKWPRDA
LFGLSASTLV TKVQIRSGEI LTKRQFNAIS LVKKGQILNA VLSEGGVKII AEVKALEDGN
LGDMIKIRTR ENKILQATVS GKDEAVIR
|
|---|
| |