| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1227 |
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| Symbol | |
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| ID | 5595701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 957571 |
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| End bp | 959097 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640929526 |
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| Product | PP family ATPase |
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| Protein accession | YP_001466818 |
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| Protein GI | 157163858 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL
[TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGTAT CAAAATTAAG TAAATTTATT ATAACTGCGG CGTTAGCTTC ATTTTTAGCT
ACCCCTATAA TGGCAAAACC AAGCACATGC TTGAGTAAAA ATTTTAGTAT GAAGATCACA
GACGATATAA GCCTTGGAGA TGTTTTAAAT CAGCTCTCTG AAATGTGTGA TTTTAGTATC
GTTGCAAAAG ATGCTTATAG CAAAAAAGAG CTTGACGATA AAGTCTTTGG CGTAAATATA
AGAAACATGA GCCTAAGCGA GGTCTTTGAT CTGCTTTTAA ATGAGAAAAA TTTAAGCTAT
GAGTTTTCAA ATAATGTCTT GAAAATCTCA TCGCTTCAAA CAAAAATTTT TAAAATAGAC
TATATCACCT CTATCCGTGA GGGCACAGCC ATCACAAAAG CTTCAGTTGA TGCCTCTCCA
TCAGAGGTTG GCAATAGCTC AAGCAGCGAT ACTAGCTCAA ACGACATAAA AAATGAAAAC
AACTTGATAA GAACAACTGA GAAATTTGAC TTTTGGGAGA AGCTTGATGC TGAGCTAAAA
GCTATCTTGA ATAATAGCAG TGAGCACATC ACGGCGCCAG ATCCTATCAT AAACCAAAAT
GCTGGACTTA TCACGGTTAC AGCGACCCCA TCACAGCTAA AACGCGTTGA AAAATATATA
GCCGAGATGC AAAGAAGGCT TAAAAAGCAA GTCATCATCG ATGTTTCTAT CATCGCAGTT
GATCTAAATA ACGAGTATAA GCAAGGCGTT GATTGGAGTA AATTTGAGCT TGGATTTAAC
TCATATATCG GCAACCCAGG TTCTAGTACT AGCTCATATG CAAGCTGGAC AAACAAGGGT
AACAGCTTAA GCGATGGCTT TGGACGCACG TTAAACATCG CTGCAAATTT AAACTTTAGC
CTTGATGGCA TGATAAATTT CCTTGAAACA AATGGTAAAA CAAAGGTCGT TTCAAGTCCA
AAAGTAACCA CTCTAAACAA CCAACAAGCG CTAATCTCTG TGGGTGATAA TATAAACTAC
CGCGTTATGG AAGAGACAGA TAATGGTAGC AACAATAACA ATAACAACAG GCTTACAACA
ACTTATAAGC AATACTCTGT ATTTATCGGT ATCTTGCTAA ATTTGCTTCC AGAAGTCTCA
GATAACAATA AGATCATGCT TCGCATCAAC CCAAGCTTAA GCAGCTTTAA GTATGCAGAA
GATGACACAA GATCACAAAA TACAGCCATT AGAGAGATCG CCCCTGATAC AGTTCAGAAA
AAACTCTCAA CCGTAGTTCA GGTAAATAGT GGCGATACGA TCATACTTGG CGGACTTATC
GGACAGACCA AAGATAAGCA AAACACAGCT GTGCCACTTC TAGCCGACAT ACCTTTAATA
GGAAGTGTCT TTAAAAGCAC AAGAGATGGC GTAAGAACTA CTGAGCTTAT CTTTGTCATC
ACGCCAAGAG TTGTTGATCT TGAAGATGCA AAACCAGTTC AGCAGTCGCT AAAAGATCTA
GGATTTTCTA AATCGATCTA TGAGTAA
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| Protein sequence | MLVSKLSKFI ITAALASFLA TPIMAKPSTC LSKNFSMKIT DDISLGDVLN QLSEMCDFSI
VAKDAYSKKE LDDKVFGVNI RNMSLSEVFD LLLNEKNLSY EFSNNVLKIS SLQTKIFKID
YITSIREGTA ITKASVDASP SEVGNSSSSD TSSNDIKNEN NLIRTTEKFD FWEKLDAELK
AILNNSSEHI TAPDPIINQN AGLITVTATP SQLKRVEKYI AEMQRRLKKQ VIIDVSIIAV
DLNNEYKQGV DWSKFELGFN SYIGNPGSST SSYASWTNKG NSLSDGFGRT LNIAANLNFS
LDGMINFLET NGKTKVVSSP KVTTLNNQQA LISVGDNINY RVMEETDNGS NNNNNNRLTT
TYKQYSVFIG ILLNLLPEVS DNNKIMLRIN PSLSSFKYAE DDTRSQNTAI REIAPDTVQK
KLSTVVQVNS GDTIILGGLI GQTKDKQNTA VPLLADIPLI GSVFKSTRDG VRTTELIFVI
TPRVVDLEDA KPVQQSLKDL GFSKSIYE
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