| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1088 |
|---|
| Symbol | |
|---|
| ID | 5597410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1035117 |
|---|
| End bp | 1037291 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640929591 |
|---|
| Product | monomeric isocitrate dehydrogenase |
|---|
| Protein accession | YP_001466882 |
|---|
| Protein GI | 157164999 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00133972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA TTATCTGGAC CAAAACCGAC GAAGCACCGC TATTTGCAAG CTACTCTCTC
TTTCCTATCG TTAAGAGCTT TTTATCCCGC GCTGGCATCA GCATAACAAG GGCTGATATC
AGCTTGGCTG GGCGAATTTT ATCTCTTTTT AGCAAAGAGC TTGGGCTAAA CAAGGCCGAT
GAGCTCGAGC TTTTGGGCGA ATTGACCGCA CACAAAGAGG CAAATATCAT AAAACTGCCA
AACATCTCAG CCACGCTCGT TCAGCTAAAA GCAGCCATTG AGGAACTTAG AAGTAAGGGG
ATAAATGTGC CGTTTTATCC AGATGAGATC ATCACAGACT ACGACGAAGA GATCGCTAAA
AAATATGCAA AAGTGCTAGG AAGCGCGGTA AATCCAGTGC TAAGACAAGG AAACTCAGAC
AGAAGAGTCT TGCCACCGGT TAAAGAATTT GCCAAAAAGC ACCCACATAG CAACGGTAAC
TGGGATAAGG CAAATAAAAC TAAAATTTGC TACATGCAAA GGGGCGATTT TTTCGAAAAT
GAGCACTCAA TAATCGCAGA AAAAGATGAG AAATTTTATA TAAATTTCAT AAGCTTGGAG
GGCAAAAAAG AGCTTTTAAA AGAGCTTGCT GCCCAAAGTG GCGAGATCGT AGATGCTACC
TTTTTAAGTG CAGATGAGCT AGATAAATTT TATGAAAGCT GCTTTGAGAG CGCACTAAAA
GAAAATTTGA CCCTTAGCCT TCATCTAAAA TGCACGATGA TGAAGGTTAG CGACCCAGTC
ATCTTTGCTC ACGCAATAAA GAGCTATTTT AAAGAGGTTT TTGAGCTATT TGGTGATGAG
TTTAAAGCTA GTGGCGTTGA GGCAAAAAAC GGCTTAAAAG ATATGTTTTC TAAAATTTCA
ACTCTTAAAA ATAAAGATGA AATTTTGGCT AAGTTTGATG AAGTTTTGAG CAAAAAAGCA
AAAATTTGGG CGCTAAATGA AAATGCCAGC AACTTTGACG TGCCAAATGA CGTCATCATC
GACGCCTCCG TGCCAGCGCT CATTAGAAAC TCTGGCAAAG TAAAAGACAA AAACGGCGAG
CTAAATTTCT CACTTTGCAT GATCCCAGAT AGGACTTACG CTAGAGTTTA TGAGGCCTGC
GTGGCGGACT TTAAGGAGCA TGGCGCGCTT GATGTGAGCA AGATCGGCAG CGTGGCAAAC
GTGGGGCTAA TGGCTAAAAA GGCCGAAGAG TACGGCAGCC ACGATAAGAC CTTTGTTGCA
AAAGAGGACG GAGAATTTGT AGTTTTTGAT GAGGCAGGCA AGAGTGTCTT TAAATTTAGC
GTCAAAAGTG GCGACATTTT TAGGATGACG CAGGCAAAGG ATGATGCGAT AAATGCGTGG
TTTGAGCTTG CTTTAAAAAG AGGCGAAATT TCAAAAGATG AGCTTATATT TTGGCTAGAT
AGTAGCCGTG CTCACGATAG AAATTTGATA GCTAAATTTG AAAAATTTAG AGATAAATTT
ACTAACGCTG GCGTGAAATT TGAAATTTTA AACTACGAGC AAGCAACGCT AAGATCGCTT
GAAGCAATAA GAGCTGGCAA AGACGTCATA GGCGTAACCG GCAACGTTTT AAGAGACTAT
CTAACCGATC TTTTCCCGAT ATTTGAGCTA GGTGGCAGCT CTAAAATGCT CTCAGTCGTG
CCACTACTTG CTGGTGGAGC GATGTTTGAG ACAGGAGCTG GCGGAACGGC TCCGACGCTT
GTAAAAGAGC TGAAAGAAAA AAATCACATG CTTTGGGACA GCCTTGGCGA GTTTTTAGCA
CTTAGTGCTT CGCTTGAACA TTTGGCTTTT TTTAGGCAAA AAAAAGAGGT AAAAGAGCTA
AGCGAGGCGC TAAATAGAGC GGTTGCTAGC TATTTGGACG AAAACAAAAC GCCAAATGCT
ACTCTTGATA CTAGAGAGTC GCACTTTTAT CTAGCGCTTT TTTGGGCGAG AGAGATGGCA
AAAAGTGGCG GGATTTTGAG CGCAATATTT GCAAATTTAG CAGACGAGCT AGAAAAAAAC
GAGAGTGAAA TTTTAAAGCA GATCAGAGAA AATGATGGTG CAAGCGCAGA ATTTGGCGGA
TACTACCTGC CAGACGAAGC AAAAGCAAAT GAGGTCATGA GACCAAGTGA AATTTTAAAT
AAAATAATAG GATAG
|
|---|
| Protein sequence | MSDIIWTKTD EAPLFASYSL FPIVKSFLSR AGISITRADI SLAGRILSLF SKELGLNKAD
ELELLGELTA HKEANIIKLP NISATLVQLK AAIEELRSKG INVPFYPDEI ITDYDEEIAK
KYAKVLGSAV NPVLRQGNSD RRVLPPVKEF AKKHPHSNGN WDKANKTKIC YMQRGDFFEN
EHSIIAEKDE KFYINFISLE GKKELLKELA AQSGEIVDAT FLSADELDKF YESCFESALK
ENLTLSLHLK CTMMKVSDPV IFAHAIKSYF KEVFELFGDE FKASGVEAKN GLKDMFSKIS
TLKNKDEILA KFDEVLSKKA KIWALNENAS NFDVPNDVII DASVPALIRN SGKVKDKNGE
LNFSLCMIPD RTYARVYEAC VADFKEHGAL DVSKIGSVAN VGLMAKKAEE YGSHDKTFVA
KEDGEFVVFD EAGKSVFKFS VKSGDIFRMT QAKDDAINAW FELALKRGEI SKDELIFWLD
SSRAHDRNLI AKFEKFRDKF TNAGVKFEIL NYEQATLRSL EAIRAGKDVI GVTGNVLRDY
LTDLFPIFEL GGSSKMLSVV PLLAGGAMFE TGAGGTAPTL VKELKEKNHM LWDSLGEFLA
LSASLEHLAF FRQKKEVKEL SEALNRAVAS YLDENKTPNA TLDTRESHFY LALFWAREMA
KSGGILSAIF ANLADELEKN ESEILKQIRE NDGASAEFGG YYLPDEAKAN EVMRPSEILN
KIIG
|
|---|
| |