Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0980 |
Symbol | |
ID | 5596413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 406853 |
End bp | 407524 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640928994 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_001466303 |
Protein GI | 157164291 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000790444 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTT TAATAGTAGA AGACGAAGTA ACGCTAAATA AGACGATTGC TGAGGGGTTG CAAGAGTTTG GTTATCAGAC AGATAGCTCT GAAAATTTTA AAGACGCTGA GTACTACATC GGCATCAGAA ACTACGACCT AGTTTTGACT GACTGGATGC TTCAAGATGG TGACGGCGTT GATCTTATAA ATATCATAAA ACATAAATCT CCACGCACTT CAGTCGTAGT TCTTTCTGCA AAAGATGACA AAGAGAGCGA GATAAAAGCG CTTAGAGCTG GCGCTGATGA CTATATCAAA AAGCCATTTG ATTTTGACAT TTTAGTAGCT AGACTAGAGG CTAGACTACG CTTTGGCGGC ACAAATATCA TCAAAATAGA CGAGCTTATC ATCAACCCTG ACGAAGAGAA GATCACATAT CTTGGCCGTG ACATCGAGCT AAAAGGCAAG CCATTTGAGG TGCTTACTCA CCTTGCAAGA CACTCAGACC AGATCGTTTC TAAAGAGCAA CTACTTGACG CTATATGGGA AGAGCCAGAG CTCGTAACTC CAAACGTTAT CGAGGTTGCT ATAAACCAAA TTCGCCAAAA AATGGACAAA CCGCTAAATA TTTCGACAAT AGAAACTGTT AGAAGACGCG GATATAGATT TTGCTTTCCC AAAAAAGCTT AA
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Protein sequence | MRILIVEDEV TLNKTIAEGL QEFGYQTDSS ENFKDAEYYI GIRNYDLVLT DWMLQDGDGV DLINIIKHKS PRTSVVVLSA KDDKESEIKA LRAGADDYIK KPFDFDILVA RLEARLRFGG TNIIKIDELI INPDEEKITY LGRDIELKGK PFEVLTHLAR HSDQIVSKEQ LLDAIWEEPE LVTPNVIEVA INQIRQKMDK PLNISTIETV RRRGYRFCFP KKA
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