| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0979 |
|---|
| Symbol | |
|---|
| ID | 5597022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 405597 |
|---|
| End bp | 406817 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640928993 |
|---|
| Product | prolipoprotein diacylglyceryl transferase |
|---|
| Protein accession | YP_001466302 |
|---|
| Protein GI | 157165522 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000424013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTAA TTGCCGTTGT TTCGGTGATG CTCTATCACT ACATAAGAGT CACCGTTTTT
CAAAGCGTAG TTAGTGAGCT AAACCAGCAA GCAGCAGATT ACAAAAACAA TCCTCAAAAT
TTCAATCCTA ACAATCTAAA AACTTTTACT ATAGAAATCC CAAACAAAAC TCTAGCCACC
GTAAAAGCAG GCGAGCTTAA AGGTGAAAAG CCCTACCTTG TGATGCAAAA GATAAAAGAT
AAGAGCATAA CCACTCTAAC AACAAGGCTA GATGACAGTA GCTACTTAGT CCTAGAAAAA
GAGACGACTC TTCAAAGCCA GATAGTCGAA GAAATTTTTA TAGATATTAT AATCGTAAAC
GTCACAGCGA TACTTTTGGT GCTATTTTAT GCACTATTTT TATCAAGAAT GCTTTTAATA
CCTATAAAAA TTTTAAGTCA CAAGCTTACA AATTTAGATG AGAAATTTCT AAAAGAAATC
GATATCAAAA GCTTGCCAGA CGAGTTTTTA CCACTTGGTA ATAGCATAAA TAGGCTAATT
TCTCGCATAC AAACTTTTGT CTTATACCAA AAAGAGCTCT TTGTAGGCGT GGCGCACGAG
CTAAAAACTC CGCTTGCCGT CATGAAAACC AAAAACGAAG TTACGCTTTT AAAACCACGC
GAGAGCGAAA AATACATAGA AGCGCTAAAA TCAAACAACG AAGCGATCAA CGGCATGAAC
GCTATGATAG GCTCAGTCCT TGAGATAGGT CGTCAAGAGG GTGCGCAGTT TGAAGAGCCG
GTAAATACCG ACGTGATCGC ATTTTTGAAA AAACTTGGCA AAAACTACGA GGTGCTCGCA
AAAGGTGAAG AAAAAAATCT CGCACTCGAT CTAAAACCTG AAATTTTTAA CCTAAATATC
CAAACCGGCC TGCTAACTCA CATCGTGCAA AATTTCGTCC AAAATGCTAT CAAATTTTCT
CCAAAAAATA GCACGATTAC GATTAGCTCA AGGGTTGAAA AGAGCAAATT TATCATCGAG
GTTGCCGACG AAGGCGCGGG TATAGACGAG AGCAAGGACT TGTTTGCTCC ATTTAAAAGA
TACGGCAACA AAGGTGGTGC TGGACTTGGA CTATTTCTCG CAAAGGGCGC AGCACAGGCA
CTTGGCGCTG AGATATCTAT CAAAAATAGA GAGAACACAA ACGGAGCAGT TGCAAGCCTC
GTTTTAAATT TAAAAGGATA A
|
|---|
| Protein sequence | MMLIAVVSVM LYHYIRVTVF QSVVSELNQQ AADYKNNPQN FNPNNLKTFT IEIPNKTLAT
VKAGELKGEK PYLVMQKIKD KSITTLTTRL DDSSYLVLEK ETTLQSQIVE EIFIDIIIVN
VTAILLVLFY ALFLSRMLLI PIKILSHKLT NLDEKFLKEI DIKSLPDEFL PLGNSINRLI
SRIQTFVLYQ KELFVGVAHE LKTPLAVMKT KNEVTLLKPR ESEKYIEALK SNNEAINGMN
AMIGSVLEIG RQEGAQFEEP VNTDVIAFLK KLGKNYEVLA KGEEKNLALD LKPEIFNLNI
QTGLLTHIVQ NFVQNAIKFS PKNSTITISS RVEKSKFIIE VADEGAGIDE SKDLFAPFKR
YGNKGGAGLG LFLAKGAAQA LGAEISIKNR ENTNGAVASL VLNLKG
|
|---|
| |