Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0922 |
Symbol | tolB |
ID | 5596310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 453678 |
End bp | 454934 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640929041 |
Product | translocation protein TolB |
Protein accession | YP_001466350 |
Protein GI | 157164610 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.484523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TTTTTCTTTT TTTGTGCGTT GCTCTAGGGC TTTATGCTGC TGATGCGACG ATATCTGTTA TAAACCAAGG TGTTGCTTTG CCAAAGATAG CTTTGCAAGA TGCAACTACA GCTGTTAGTG ATGCAGGCTT TAGAGATAAA TTCTTTAAGA TCATGCTAGG CGACTTGAAA GTTAGTTCTG ACTTTGAGGT TATCGAAGAT CACGTGCCTT CAACCTACGA AGGAACGGCA GCTACAAATA CAATGAGCGA CAAAGGTGTT GAGCTTATCT TTAGATATGC TCTTGAGGGT TCTATGGGCT CACCTCTTAC TTTAAGAGTA AAACTCATCG ACGCAAAGAC TGCAACTACA AGGTATGAGA GAGTATATAA CATGCCTGAT GGTGCGAAGT ATCCGTTTTT GGCACACAAA AGCATAGTTG AGCTAACAAA TGAGCTAAAT TTACCACCAG TTGGTTGGAT GGAGAAATTT ATCATTCTTG CAAAATATAC TTCAGCTCGC CAAAGCTCTA TTATAGTGGC TGATTACACA CTTACATATC AAAAGACAAT CGTAAGCGGT GGTCTAAACA TCTTCCCTAA ATGGGCAGGC GCTGATCAAA GTAAATTTTA CTATACATCT TATGTGAATA ATAAACCAAC TTTGTTTAGA TATGACCTAA ATTCAGGCAC AAAAACGAAG ATAATCGACA GCGTTGGTAT GCTTATAGCT TCAGACGTTA GCAAAGATGG AAGCAAAATT TTATTAACTA TGGCGCCAAA AGATCAGCCA GATATTTTTA TCTACAACAC AGGTAGTAAG AATTTAACTC AGATAACAAA CTATCCAGGC ATTGACGTAA ATGGAAATTT TGTAGATAAT GACAGCAGAA TAGTTTTTGT TTCAGATAGA CTTGGATATC CAAACATCTT CGCAACACCT GCAACCTCAG GTGGAAGTGT TGAGCAAATG GTATTTCATG GTAAAAACAA CAACTCAGTA AGCACTTTTG AAAACTATGT AGTTTATTCA AGTAGAGAAG CTAGTGGTGG TTTTAACATC TATCTGATCT CAACTCAAAC AGATTTTATC CGTCAGCTTA CAGCAAATGG TAAAAATAAC TATCCAAGAT TTTCAAGTGA TGGTCAAAGT GTCGTATTTA TTAAAGAACT TGGCGGTCAA AGCTCGCTTG GCGTTGTTAG ATTAAATGAG AACAGAAGTT TCCAATTTCC ACTAAAAGTA GGTAAAATTC AATCTATTGA TTGGTAA
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Protein sequence | MKKIFLFLCV ALGLYAADAT ISVINQGVAL PKIALQDATT AVSDAGFRDK FFKIMLGDLK VSSDFEVIED HVPSTYEGTA ATNTMSDKGV ELIFRYALEG SMGSPLTLRV KLIDAKTATT RYERVYNMPD GAKYPFLAHK SIVELTNELN LPPVGWMEKF IILAKYTSAR QSSIIVADYT LTYQKTIVSG GLNIFPKWAG ADQSKFYYTS YVNNKPTLFR YDLNSGTKTK IIDSVGMLIA SDVSKDGSKI LLTMAPKDQP DIFIYNTGSK NLTQITNYPG IDVNGNFVDN DSRIVFVSDR LGYPNIFATP ATSGGSVEQM VFHGKNNNSV STFENYVVYS SREASGGFNI YLISTQTDFI RQLTANGKNN YPRFSSDGQS VVFIKELGGQ SSLGVVRLNE NRSFQFPLKV GKIQSIDW
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