Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0890 |
Symbol | |
ID | 5596249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 647901 |
End bp | 649850 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640929223 |
Product | MadN protein |
Protein accession | YP_001466531 |
Protein GI | 157164294 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00448941 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTAT TTAAACAGAT TATGATCGCT GTGATAGCTT TTGGCATCGT GATTTTTATG GCTGTTGGCT ACTTAAATTT TAAGAGCCTA AATGGATACA TCAACGACCA GCTCGGTGAA AACGCAAGGC ACACAGCAAA CTCGCTTGGA CTTGCTTTAA AGCCGATTGT TGATCCTGAG GATATGTCTT TGGCACAAAC GATGATAAAT TCTATGTTTG ATAGCGGCAG ATACAAGCTC ATTAAACTTG AAGACGTCGA TGGTAAGGTG CTCATAGAAA ATTCTCAACA AACTATCGTT AAAGATATCC CTGAGTGGTT TTATAAGATC GCTAAATTTG AAGCTCCTGT TGCAACTAGC GAGATCATGA CTGGCTGGGC AAAATTTGGC ACTTTATATG TTCAAGGCAG CACAGCACTT GCCTACAATG AGCTTTACTC AAACTCAAAA AATATTTTTA ACTTTCTAGC TTTAATGATC ATCATCGCTC TTGTCGTGGC ATTTTTTGCT CTTAAGGCGA TATTTAGACC ACTTGTTAAG GTTCAGGATC AAGCTGAAGC GATACTTGAT AATAAATTTA TCATCCAAAA GAGAATTCCA TTCACAACAG ACCTTAAAAA GATGGTGCTT GCCATGAACT CGATGGTTAG CAAGGTTCAA GACATATTTG AAAGAGAGGC CGCAACACTT AGCAAGTATC AAGAGCTTTT ATATAAAGAC TCTATGAGCG GCACTTACAA TAGAAGATTT TTTCAAACTA AATTTAGTGA GTATCTAGCA AGTGAAGAGT ATTCAAGCGG TGTTGCATCA CTTGTTAGCT TTAAAGATCT AGCTGGGCTA AAAGGCGTTC TTGGCTTTGA AAAATGGCAA AGTGTCATCA TAAAAATAGC CCAAATTTTA CAAGAAAAAT CTACCGAAAA TGACCAAAAT GCGATCGTTG CAAGGCTAAA CGACAACGAC TTTATCTTGC TTTCTTACGG TAAAAACTCA TCAAATTTCT CAGCTTTAGA CGATAAGATC ATGGCTGAGT TTAAAAAACT CTATGCAAAT TTCTCTATAA ATGATAGTGA ATGCCCAGTC AATGCTGCTA TTGTTGAGTA CTCGCCAAGC ACTGATATGA GGACACTACT TACGTCTGCT GACGTCACTT TGGCTAGTGC AAGACTGGCT GGCTGCTTTA CTTGCAAGGA ATTTAATGCA AATCAAAACA CCTTAGTCAT CGGCAAAGAG AAATACAAAG AGCTTATCTT TGACTCTATA AAAGAGGATA AATTTAAATT TGCAGCTCAA AAAGTAGTTG GTTTTGACTC AAACTTTGAG CAGTACGAAC TCTATCTAAG GCTAGTTGAT AGCGAGGGCA AATGGCGTAT GGCATCATAC TTTATGCCAA TGGTAAATGA GTTAAATTTA GGTGCGATGC TCGATCTTCA TATCCTAAAT AGAATCGCTA GAATTTTGCC TGAAAATATC TTGCCTCAAG GAAGCTTGGC GATAAATTTG GGTAAAGAGA TATTAAGCTC GGATGAGAAT TTCTCAAAAC TTGAAGCTAC GCTTAAGAAA ATCGCTCAAA TTTCAAAATC TAAAAACTAT ATAGAAATTC CAAACAAAGA CGATATTAGT ATCGAAAGTA TAGTTAGACT TACTAAAAAA TTAAAAGAAC TCGGCTTTGG TTTTGGATTT GACCACTTTG ATCTTAATGC AAAAGGCATT GAGAAGCTAA AAGAATTTAA TCCAGACTAT GTAAAGATCC AGTCAAGCGT CTTAATTGAC TTTTTAAGTG ATAAATCAGG AGCAAATACA AAACAATCAC TAGATGTTGT TTTAAGCTCA AAAGATATCA TTTTGATTGC GATCGGTGTT GAGAGCGAAG AGCAAAAGAG TAAGCTAATT GAGCTTGGCA TTAAAAATAT GCAAGGAATT TACATAGATG AAATCAAAAA TATTGGATGA
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Protein sequence | MTLFKQIMIA VIAFGIVIFM AVGYLNFKSL NGYINDQLGE NARHTANSLG LALKPIVDPE DMSLAQTMIN SMFDSGRYKL IKLEDVDGKV LIENSQQTIV KDIPEWFYKI AKFEAPVATS EIMTGWAKFG TLYVQGSTAL AYNELYSNSK NIFNFLALMI IIALVVAFFA LKAIFRPLVK VQDQAEAILD NKFIIQKRIP FTTDLKKMVL AMNSMVSKVQ DIFEREAATL SKYQELLYKD SMSGTYNRRF FQTKFSEYLA SEEYSSGVAS LVSFKDLAGL KGVLGFEKWQ SVIIKIAQIL QEKSTENDQN AIVARLNDND FILLSYGKNS SNFSALDDKI MAEFKKLYAN FSINDSECPV NAAIVEYSPS TDMRTLLTSA DVTLASARLA GCFTCKEFNA NQNTLVIGKE KYKELIFDSI KEDKFKFAAQ KVVGFDSNFE QYELYLRLVD SEGKWRMASY FMPMVNELNL GAMLDLHILN RIARILPENI LPQGSLAINL GKEILSSDEN FSKLEATLKK IAQISKSKNY IEIPNKDDIS IESIVRLTKK LKELGFGFGF DHFDLNAKGI EKLKEFNPDY VKIQSSVLID FLSDKSGANT KQSLDVVLSS KDIILIAIGV ESEEQKSKLI ELGIKNMQGI YIDEIKNIG
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