Gene CCC13826_0768 details

Gene Information

• Locus tag: CCC13826_0768
• ID: 5596693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 311970
• End bp: 312659
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640928910
• Product: response regulatory protein
• Protein accession: YP_001466220
• Protein GI: 157164544
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.319158
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAATG CATTAGAATT AAAAAATATT TGTAAAATTT TTGGCGATGT AAAAGCACTT 
GATGATATAA GTTTTGAGGT TAAAAAGGGC GAGTGGGTCA GCGTCATGGG ACCAAGCGGT 
AGCGGCAAGA GCACACTTGT AAATATCCTT TCTCTAATGG ATACTCCAAG TAGCGGCGTT 
TATATGCTTG GTGGCGATGA TGCGAGCAAT CTAAATGCGG ACGATACGCT TAAATTTAGA 
CGTGAAAAGA TCGGCCTTAT ATTCCAGCAG TTTCACCTCG TGCCGTATCT TAGTGCCCTT 
GAAAACGTGA TGATAGCGCA GTATTATCAC AGCTCAGTGG ACGAAGAGGA CGCTAAAAGA 
GCGCTTGAGG CAGTTGGACT TTCTCACAGG CTCACGCATA GACCAAGCCA GCTAAGTGGT 
GGCGAGCAGC AACGCCTTTG TATCGCACGC TCACTCATAA ACGACCCTGA AATTTTAATA 
GCAGACGAGC CAACTGGTAA CCTTGACGAG GCAAATGAGA GGATCATACT TGATCTATTT 
TGCAAGCTAA GAAAAGATGG CAAGACGATA CTTCTAGTCA CGCACAACCC AGATTTGGGC 
GAGTACGGCG ATAAGATCGT ATATCTAAGA CACGGCAAGT TAGAGAAAAT TCGCACTATC 
GAAAATCCAA AGGTGCCAAA TGAAATTTAA 

 

Protein sequence

MQNALELKNI CKIFGDVKAL DDISFEVKKG EWVSVMGPSG SGKSTLVNIL SLMDTPSSGV 
YMLGGDDASN LNADDTLKFR REKIGLIFQQ FHLVPYLSAL ENVMIAQYYH SSVDEEDAKR 
ALEAVGLSHR LTHRPSQLSG GEQQRLCIAR SLINDPEILI ADEPTGNLDE ANERIILDLF 
CKLRKDGKTI LLVTHNPDLG EYGDKIVYLR HGKLEKIRTI ENPKVPNEI