Gene CCC13826_0763 details

Gene Information

• Locus tag: CCC13826_0763
• Symbol: sodB
• ID: 5596154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 305634
• End bp: 307577
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640928905
• Product: superoxide dismutase
• Protein accession: YP_001466215
• Protein GI: 157165701
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0672] High-affinity Fe2+/Pb2+ permease
• TIGRFAM ID: [TIGR00145] FTR1 family protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.745778
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAT TTTTTAAATT TATGCTTATC ATGCTACTTC CTATCTGGCT TGTGGCAAAA 
AATGACGACT ACACACAAGT CGCAGCTCAG ATAAAAGAGT CATTACAAAA AGTAATAACA 
GAGTATAGAG CTGGCAATGT CGAGCAAGCA GTTAGCGATA CTCAAAATGC TTATTTTGGT 
CTGTTTGAAG ATGTCGAAGC TGGCATCAGA ATAAATTTAG GTCAGAAAAA AGCTTACTCT 
ATGGAGAAGC AGTTTGGCGA GATCAGAAAG GCGATAAAAG CTGGCGAAAC ACCAGATGAT 
GTGCAAAAAA GAATAGATCA GATAAATAGC GAAATCGCTG AAGTTTTGCC AGTTATTTTA 
AATGGACATA AGCTTGTTGG TGAGTACTCA GACAGCCCAG CACAAGCTGC TGCAAGTGGC 
TATGACACTT CTAAATTTAT CCCTGAGTGG AAGGTGGCAT TTGAAAATTT ATCAGCTGCT 
CTAGATAAAG CTATAGCAAG CTACGAGGGC GATAAACAAG ATGATGCTAA AAATTCTATC 
CAAGATGCTA AATTTAATGA TTATAGAAAC ACTCAACTTG AAATTGCCGT TCGCCAATAT 
ATAGAAAATG GCAAAAGCAT AGATGCTGAC ATCCAAAGAA AGATGGGTGA AGCGATCAGT 
GGCATCACAA ATGGCATAAG CAAAGATGAC TTTAAAGTAA AGCTAGAAGA GATCAAAAAA 
CTAGCTTATG ATGCCGTTGC AAAACTCCCA GCTGAAACAG TAAAACTAGC AAAAGTTGAT 
ATGAGTAGTG CAGCATCTAG CGATAGCAGC GAAGATAGTG GTACAGACTA CACTCAAACT 
GTTAAAAACA TAAATGATAA AATTCAAGCA GCCATCGCGC TTTACAAAGG TGGCAATAGC 
GCTAAAGCTA TGGGCGATAT CCAAGACATC TACTTTGATG AGTTTGAAGG TAGCGGCATG 
GAGAACAAAG TAGGTGCGAT AGATGTAAAT TTAAAAACAG CTATCGAAGC TACATTTGGT 
AACCTTGTAG CCCTTATGAA ATCAGGTGCA GACGAAAAAA CACTTGAAGA GAGTGCAAGC 
AAGATGTCAT CTCAGCTAGC AGCCGCACTT GAGAAAACTA GCGGTTCAAG CTCACCTTGG 
ACACTATTTA TCTGGGCACT AACTATCATC TTAAGAGAGG GTTTTGAAGC TCTTATCATC 
GTTGCAGCCG TCGTTGCATA TCTTGTAAAA ACTGGCAATG CAAAATCTAT GGGCAAGGTC 
GTATATAGCT CAGTTGGCGT GGCTGTCATC TTAAGCTTTG TCATGGCTTG GATAATGAAC 
GTCATCTTTG GCGAGGCAGC AGGTCAAAAA AGAGAGCTTA TGGAAGGCAT CACGATGCTT 
GTTGCAGTGG GACTTCTATT TTATGTTGGC TTCTGGCTTC TTTCAAATGC TGGCGCTAAA 
AAATGGAACG ACTACATCAA ATCTCACTTA TCTGAGTCTA TCTCAAGTGG CTCAAGCACG 
ATGCTTTGGT GGACTGTATT TTTAGCGGTA TTTAGAGAGG GCGCTGAGAC AGTGCTATTT 
TATCAAGCGC TTATCTTTGA CGCAAAAGAC TCAGCTGGCT ACTCAATGAT CGCAGCTGGC 
TTTGTTGTAG GTCTTATCGT TCTTTTAATA GTCTATTTCT TATTTAAAAT TTTCGCTATT 
AAAATTCCTA TTAAGCCATT TTTTATATTT ACATCAGCGA TCATCTTTTA CATGTCGATC 
GTCTTTGTTG GCAAGGGTGT TGGCGAGCTA GTTGAGGGCA AAATTTTCAT CCCAACTATC 
ATAAAAGGAC TAAATTTTCC TGACTGGATG AGAGACTGGC TAGGACTTAT GCCATATTAC 
GAGAGTTTAA TACCTCAAAT CATTATGGTG CTTGCCCTAA TTATAGGCAT CGTTATTATG 
AAATCAAAAC AAAATAAAAA CTAA 

 

Protein sequence

MNKFFKFMLI MLLPIWLVAK NDDYTQVAAQ IKESLQKVIT EYRAGNVEQA VSDTQNAYFG 
LFEDVEAGIR INLGQKKAYS MEKQFGEIRK AIKAGETPDD VQKRIDQINS EIAEVLPVIL 
NGHKLVGEYS DSPAQAAASG YDTSKFIPEW KVAFENLSAA LDKAIASYEG DKQDDAKNSI 
QDAKFNDYRN TQLEIAVRQY IENGKSIDAD IQRKMGEAIS GITNGISKDD FKVKLEEIKK 
LAYDAVAKLP AETVKLAKVD MSSAASSDSS EDSGTDYTQT VKNINDKIQA AIALYKGGNS 
AKAMGDIQDI YFDEFEGSGM ENKVGAIDVN LKTAIEATFG NLVALMKSGA DEKTLEESAS 
KMSSQLAAAL EKTSGSSSPW TLFIWALTII LREGFEALII VAAVVAYLVK TGNAKSMGKV 
VYSSVGVAVI LSFVMAWIMN VIFGEAAGQK RELMEGITML VAVGLLFYVG FWLLSNAGAK 
KWNDYIKSHL SESISSGSST MLWWTVFLAV FREGAETVLF YQALIFDAKD SAGYSMIAAG 
FVVGLIVLLI VYFLFKIFAI KIPIKPFFIF TSAIIFYMSI VFVGKGVGEL VEGKIFIPTI 
IKGLNFPDWM RDWLGLMPYY ESLIPQIIMV LALIIGIVIM KSKQNKN