| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0746 |
|---|
| Symbol | |
|---|
| ID | 5596753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 287873 |
|---|
| End bp | 288514 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640928891 |
|---|
| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
|---|
| Protein accession | YP_001466201 |
|---|
| Protein GI | 157165006 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000577745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG TGCTTGCGAC ATCAAATTTA GACAAAGTAA AAGAGATAAA AGAGTTTTTA
AAAGGCTATG AAATTTACGC TCTAAGTGAG GTTGTAAAGC CGTTTGAGAT CGTTGAAGAT
GGCAGCACTT TTCAAGCAAA TGCGCTCATA AAGTCAAGAG CCGTCTTTGC AAAGCTTAAA
GAGCTTGGGC TTGAGGACGA ATTTGTCTCG CTTAGCGATG ATAGTGGCAT CAGCGTGGAC
GCACTTGGTG GCGAGCCAGG GATCTACTCA GCGCGCTACT TTGACCTTGA TGAAAATGGC
AAAGTGTGCG GCAAAAACGC AAATGACGCA AATAACAGAG CAAAGCTGAT TAGCAAGCTA
AAGGCGTTAA ATTTAAAGAG CTCACCAGCT CACTACACCG CTTGTATCGC CATTAGCTCA
AAATTTGGCG ACTACACGGC GCATGGCTTT ATGTATGGCG AAGCGATAGA TGAGGAGCGC
GGCACAAACG GCTTTGGCTA CGACGCACTT TTTATCCCAA ATGGCTTTAA CAAGACGCTT
GGCGAGCTAG ATAACGAGAC AAAGCTCAAA ATTTCTCACC GCTCAAAGGG GCTGGAGCTT
GCAAATTTCG TGCTAAAGAG CCTAAAGAAA AACTTTAGTT AA
|
|---|
| Protein sequence | MKIVLATSNL DKVKEIKEFL KGYEIYALSE VVKPFEIVED GSTFQANALI KSRAVFAKLK
ELGLEDEFVS LSDDSGISVD ALGGEPGIYS ARYFDLDENG KVCGKNANDA NNRAKLISKL
KALNLKSSPA HYTACIAISS KFGDYTAHGF MYGEAIDEER GTNGFGYDAL FIPNGFNKTL
GELDNETKLK ISHRSKGLEL ANFVLKSLKK NFS
|
|---|
| |