Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0496 |
Symbol | mnmC |
ID | 5597299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1505041 |
End bp | 1506906 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640930057 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_001467336 |
Protein GI | 157164134 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG CAAATTTAAG CTTTAAAGGG CAAATTCCAT TTAACGAAGA GTTTGACGAC ATCTACTTTA ACACCGAAAA ACCTTGGCTT GAGAGCGAAT TTGTCTTTAC GAGCGCACTT GATGAAATTT GGCAGAGCAA AGATAGCTTT ATAGTCGCTG AGACTGGCTT TGGTGCTGGG CTAAATTTCT TCACGCTTTG TAAGAAATTT AAAAATAGCT CCAAAAAGCT TCACTTTGTT AGCATCGAAA AAAGCCCTAT AAAAAAAGAA GATCTTTTAA AAATTTATGA AAATTTAGGC ATTTTTAAAG CTTATGTTAA AAAGCTAGTT TCGCTCTATC CACCACTAAT CTCAGGCATA CACCGCATAA ATTTCGCACC AAATATCACC CTTGATCTTT GCTACGGCGA GGCAGATCAA ATTTTGCCTG AGCTTGATTT TGCCGCCGAT ATCTGGTTTT TAGACGGCTT TGCCCCAAGC AAAAATGGCT CGATCTGGAG CGAGGATGTC TTTAAGCAGA TCGCAAGGCT AAGCAGGGTT GGCACCATAG CTAGAACCTA CTCGTGTGCA AAAATAGTGA AAGTTGGGCT AAAAAATGCT GGCTTTTTGC TGAGCCTAAA AGAGGGCTAC GCTAGAAAAC GCCAGATGAG TAGCGCCGTG CTAGAGAAAA AGGATGAAAA TTTAAAGGAC GCTTGGTTTG CTAGATGCGA GCCTGTTGGC AGCGTAAATG GCAAAACAGC GCTTGTGATA GGAACAGGAG TGGCTGGGCT TGCCACCGCT GGAGAGCTAG CCAAAAATGG CTTTAAAGTG GTGATCGCCG AGGCAAAGAG CGAGGTCGCG ACAAATGGCT CAGGTAATCA CTGTGGTGCC TTGATGCCAC TAGTTACGAA GCCTGGGGTA AATTTAGGCC GCATGCATAT AAATGCGTTT TTACAGGCAG TGAGATTTTA CAAGGCAAAT TTACCAAAAA GTCTCATCAA ATTTAATGGC TGCATCGACT ATGCGTTTGA TGATGAGCTT GTCAAGCGAT ACTCCTCGTG GCAGGATCAA AGCGCGGAGG ATCTTTTTAA ATTTAATGAG AGTTTAAAGC CATATCCTGG GATATTTATA AAAGAGGCGG CTTATGCTAG ACCAAGAGAA ATTTGTAAAT TTCTATCAAG TAACTTTGAA ATTTTATTTA ACCACGAGTA CGAAAGTAGG GCGCACCTGC AAAATGGCAA GATAAGCGTT AAATTTAAAA ATAAAAAAAG CTTGGAGACT GATATCTTAG TCTTTTGCAC AGGTAGCAAA AGTAGCGAAA TTTTTAAAGA CTATGACATG CAAATAAGTA GCGTCCGTGG TCAAGTCACG CACCTAAAAC CAGTGCTAAA AAATGAGCTG CCACTAAGCG CAAAAGGCTA CATCTGCCCA GCCGTAAAAG GGGTGCAAGT CATCGGCGCA ACCTACGCTA GAAATGAAAT TTGTGACACG CCAAAAGATG AGGATAATGC TAAAAATTTA AGCGACGTGA GCGAGTTTTT TGACACCACA AAAGCCGCTA TCATCGGCTC ACGTGTGGGA TATAGAAGTT ATAGCGGAGA TAGATTTCCG ATAATCGGCG CTTTGCACGA CGAGGAGTTT TACAAGCAAA ACTACAAAGG GCTATTTTGG AGTAAAAATA AAGATAACAA TCCAAAAGCA AGCTACGAAA AAAATGTCTT TGTAAATTTT GCTCACGGCT CACGTGGCCT TGGCACGGCG ATACTTGGAG CAAATTTGAT AACCGATCTT GTGCTTGCTC GCCCACTTTG CATAGAAAGA TCGCTATTTT TTGAGCTTCA TCCTGCTAGA TTTTTGATAA GAAAGCTAAA AAAAGGACTA AAATAG
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Protein sequence | MKNANLSFKG QIPFNEEFDD IYFNTEKPWL ESEFVFTSAL DEIWQSKDSF IVAETGFGAG LNFFTLCKKF KNSSKKLHFV SIEKSPIKKE DLLKIYENLG IFKAYVKKLV SLYPPLISGI HRINFAPNIT LDLCYGEADQ ILPELDFAAD IWFLDGFAPS KNGSIWSEDV FKQIARLSRV GTIARTYSCA KIVKVGLKNA GFLLSLKEGY ARKRQMSSAV LEKKDENLKD AWFARCEPVG SVNGKTALVI GTGVAGLATA GELAKNGFKV VIAEAKSEVA TNGSGNHCGA LMPLVTKPGV NLGRMHINAF LQAVRFYKAN LPKSLIKFNG CIDYAFDDEL VKRYSSWQDQ SAEDLFKFNE SLKPYPGIFI KEAAYARPRE ICKFLSSNFE ILFNHEYESR AHLQNGKISV KFKNKKSLET DILVFCTGSK SSEIFKDYDM QISSVRGQVT HLKPVLKNEL PLSAKGYICP AVKGVQVIGA TYARNEICDT PKDEDNAKNL SDVSEFFDTT KAAIIGSRVG YRSYSGDRFP IIGALHDEEF YKQNYKGLFW SKNKDNNPKA SYEKNVFVNF AHGSRGLGTA ILGANLITDL VLARPLCIER SLFFELHPAR FLIRKLKKGL K
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