Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0479 |
Symbol | rfaF |
ID | 5597419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1486354 |
End bp | 1487307 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640930041 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_001467320 |
Protein GI | 157163923 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTTT TTATCGAGCT TCCAACCTGG CTAGGTGATA GCGTGATGGC AAGCGCTGCG ATAGAAAATT TGGTGCAAAA TGAGAAGAAT TTACAAATCG TTTTTTTTGG CTCATTTATA GCCTGCGAGC TTTATAAAAG CCATCCAAAC TGCGAAAAAG TTGTCGTTGA TGAGAGTAAA AAAGCTAAAT TTAGGTTTTT ATCTCTTGCA AAAAGCGCAA AAAGTCTTGG CAAATTTGAT CTAGCTCTTA GCTTTAGAAG CTCGTTTGCT AGTAAATTTT TGATATTTTT TATAAACGCT AAGAAAAAAG CCATCTTTAA AAAGAGTAAA ACCGTCCTTC ATCAGGTGCT AAAATATGCA AATTTTGTAA AAAATGCCCT TGGCTTGGGC GAAATTTCTA CTCAGTTAAA GCTACATTTT ACACCTCAAA TTTCAGCTAA AAAAACACTG GCTCTAAATC CAGGTGCGAG CTACGGAAGT GCAAAAAGAT GGTATCCAGA GTATTTTGCA CAGGTGGCTT TAAATTTCAA AAATGAGTTT GAGATCGTAA TCTTTGGTGG CAAAGGCGAG CAAGAAATTT GTGAAAAAAT TGAGCAAATT TTAAAAGAAA ACGGCGCAAC TTGCCAAAAT TTAGTTGGCA AAACAAGCGT CAAAGAGCTT TGTGGGCGCA TAGCTGGGCT TAGACAAAAT GGCATTTTCG TCACAAACGA TAGCGGTCCT ATGCACGTAG CTGCCGCCTT TCATGTGCCA ACAATCGCTC TTTTTGGACC GACAAAATTT AGCGAAACCT CGCCATGGGG AAATGAATTT GCAAAGATAG TGCATCTAAA TTTAGCTTGC ATGCCCTGTA TGAAGCGAGT TTGCCCACTA AAAACGCATG CTTGCATGAG AGAGCTAAAG TCCCAAATGG TGATAGATGA GATAAATTTA CTAAGAAAAG AGAGTGGGAT TTAG
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Protein sequence | MRVFIELPTW LGDSVMASAA IENLVQNEKN LQIVFFGSFI ACELYKSHPN CEKVVVDESK KAKFRFLSLA KSAKSLGKFD LALSFRSSFA SKFLIFFINA KKKAIFKKSK TVLHQVLKYA NFVKNALGLG EISTQLKLHF TPQISAKKTL ALNPGASYGS AKRWYPEYFA QVALNFKNEF EIVIFGGKGE QEICEKIEQI LKENGATCQN LVGKTSVKEL CGRIAGLRQN GIFVTNDSGP MHVAAAFHVP TIALFGPTKF SETSPWGNEF AKIVHLNLAC MPCMKRVCPL KTHACMRELK SQMVIDEINL LRKESGI
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