Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0391 |
Symbol | |
ID | 5597565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1392849 |
End bp | 1394249 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929957 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001467236 |
Protein GI | 157165314 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCA GAAGAGAACA TGATTTTATT GGTGAGTTGG AAATTTCTGA CAATTTTTAC TATGGTATCC AAACATTTAG GGCTACTGAG AACTTCCACA TGAGTGGTAG AACATTAAAA GAGTATCCAT ACTTCGTAAA GGCATTTGCA CAGATCAAAA AAGCTGCTGC GCTTGCAAAT AAAGAGGTTG GCGTTTTAGA TCCAAAGATA GCTGATGCTT TGGCAAAAGC TGCTGATAGA GTAATAGCTG GTGAGTTTTT AGATCAGTTT GTCGTTGATA TGGTTCAAGG TGGAGCAGGA ACAAGTACAA ATATGAACTC AAACGAGGTT ATCACAAACA TCGCGCTTGA GAGCCTTGGT CATAAAAAAG GCGAGTATCA ATACATCCAT CCAAACGATC ACACAAACCT TGGACAAAGC ACAAATGACA CTTATCCAAG CTCTATTAAA GTAGCAACTT ATGCAAAACT TACTGACTTG CTTGCTGCTA TGAATTTACT AAAAGATGAG CTTGAGAAAA AAGCAAAAGA ATTTAAAGAT ATCATCAAAA TGGGTAGAAC AGAGCTTGAA GATGCCGTCC CTACAACACT TGGCAACACT TTTAACGCAT TTGCAAGCTA CATCAAAAGT GACATCGAAA AGATCACAGC TGCTAGAGAG TCAATGACGC ATCTAAACAT GGGCGCAACT GCGATAGGCA CAGGCATCAA CTGCCACCCA GAGTATAAAA ATGTAGTTGT TAAAAAACTA AAAGAGATCA CTGGAGTTGA TTTTAAAAAG GCTGATGACT TCATCGCAGC TACGCAAGAT ACTGCAGACT TCGTTCACGT AAGTGGTGCG CTTAAAACTG CAGCTGTTAG ACTTTCAAAA ATTGCAAATG ACTTAAGACT AATGAACTCA GGTCCAAGAT GCGGTCTTGG TGAGATAAAT TTACCTCAAA TGCAACCAGG CAGCTCAATC ATGCCAGGCA AGGTAAATCC AGTTATCGCT GAGGTTGTAG GTGAAGCGTG CTATGAGGTT ATTGGCAACG ACGTAACTAT CATGCTTTGC TCTGAAAGAG GCGAATTTGA GCTAAATGCA TTTGAGCCAG GCATCGCTTA TGCGCTATTT AACTCTATAT TTATCCTTGA AAATGCTATG AAAACATTAG CTGAAAAAGC TATCAAAAAA CTTACAGCAA ACCCTGAGGC TTGCCTAAAA TCAGTTCTTG GCTCAGTTGG TATCGTAACA GCGTTTAACC CATATATCGG TTATGAAAAA TCAGCAAGTA TCGCTAAAGA AGCCCTTCAA ACAGGCAAAG CAGTTGGCGA TATCTGCTTA GAGAGAGGCT ATCTAAGCAA AGAAGAGATC GATAAGATTT TAGAGCCTAA AAATATGCTA AATCCGAGCA TGGTTAAGTA A
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Protein sequence | MATRREHDFI GELEISDNFY YGIQTFRATE NFHMSGRTLK EYPYFVKAFA QIKKAAALAN KEVGVLDPKI ADALAKAADR VIAGEFLDQF VVDMVQGGAG TSTNMNSNEV ITNIALESLG HKKGEYQYIH PNDHTNLGQS TNDTYPSSIK VATYAKLTDL LAAMNLLKDE LEKKAKEFKD IIKMGRTELE DAVPTTLGNT FNAFASYIKS DIEKITAARE SMTHLNMGAT AIGTGINCHP EYKNVVVKKL KEITGVDFKK ADDFIAATQD TADFVHVSGA LKTAAVRLSK IANDLRLMNS GPRCGLGEIN LPQMQPGSSI MPGKVNPVIA EVVGEACYEV IGNDVTIMLC SERGEFELNA FEPGIAYALF NSIFILENAM KTLAEKAIKK LTANPEACLK SVLGSVGIVT AFNPYIGYEK SASIAKEALQ TGKAVGDICL ERGYLSKEEI DKILEPKNML NPSMVK
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