Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0370 |
Symbol | aroQ |
ID | 5596465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1375519 |
End bp | 1375998 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929939 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001467219 |
Protein GI | 157165592 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00140278 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAGA AGCTAAAAAT AATGGTTATC CAAGGCCCAA ATATCAACAT GCTTGGCGCT AGAGAGCCAG GAATTTACGG CGTTATGAAG ATGGAGGATA TCCACTCTCA AATGAAGATC GTTGCTGATC AAAATGACGT TGAGATCGAG TTTTTTCAAA GCAACCTTGA GGGCGAGCTA GTCGATAAGA TCCAAGAGTG CTTGGGTGAT GCTGATGGCA TCATCATAAA CCCAGCCGCT TACACTCACA CCTCTATCGC TATCCGTGAC GCGCTAAGTG CGGTTGCACT GCCAGTTATC GAGGTGCATA TCAGCAACGT TTATAGAAGA GAAGAGTTCC GCCACAAAAG CCTCATCGCA CCAGTTGCAG CAGGCCAGAT CGTGGGCTTT GGACCAGTTG GCTATCATTT AGCGATGATA GGCATGCTTC AAATTTTTGA GCAAATCAAA GCAGTAAGAG CAAATCAAAA AGCACAATGA
|
Protein sequence | MDKKLKIMVI QGPNINMLGA REPGIYGVMK MEDIHSQMKI VADQNDVEIE FFQSNLEGEL VDKIQECLGD ADGIIINPAA YTHTSIAIRD ALSAVALPVI EVHISNVYRR EEFRHKSLIA PVAAGQIVGF GPVGYHLAMI GMLQIFEQIK AVRANQKAQ
|
| |