| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0247 |
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| Symbol | |
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| ID | 5596074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1657250 |
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| End bp | 1659160 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640930203 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001467480 |
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| Protein GI | 157164738 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGTG ACGAATCGCA AAAAAAGCAC TTTAGTATGG TTAAAACTGT CACTTTGGTC
GTGGTTTTGC TTTTTGCTTT CTTTGTAATT GAAAATTTAA CTGTCTATTC ATATAAATAC
AATAACGCGC TCTCTACAAA CAACTTTAAC CTCAAAAAAA GAACTGAGTA TTTAACATAT
CAATATGTAA ATTATCTTAA AAATATAAGT AAATTTAACA TTATAGATTT TCAAAATTAT
ATAACCGACA ACGCTGTTGG CGATATCTTT TTGCTAAAAG AAAATGGCAA AAACGGCTTT
AAGATAGAGG CCTCTTCAAA CAAAAGCCTC GTAAATAAAG ACTACGAAGA CAAGAGCTGT
GGCGACATCT ACTCGCATGA TTTTCAAAAG GATTATTTCT GGGCTGAAAT TTTGCCAGAA
AACAGTGCCA AAGTATGTAT GTTTGTCGCC GTAAATGACT ATATTTTGGG CTTTAAAGCG
CATATCGATC AAAGGATAAC TGGCACTAGC GACCCATTTT ATTTTCAGTG GCTGATGAAA
AACATGACTC TTACTTTGAT CTTAAGCTCG ATTGGTCTAT TTTTAGGGCT TGCGGTCTGT
CTTTGGTTTG TATTTAAGTA TCTAAACATC AAATTTGACT ATCTAAAAGT AAAAGAAGAG
AGCACTATTA AGATCGCTGA ACTAAAAGAG AGGCTATACA TCGATCCGAT GACTGGACTT
TTTAACAAGG CAGCACTCAT AAAAGATGCG AGCGAGTATA AATATCCAAA AGTGATACTT
ATGGATATCG ATGATTTTGG CAAGATGAAC GACTACTACG GCAAATACGT GTGTGACCAG
ATACTAAAAC AGATGGCAAA TCTCATCAAA GAATTTGCTA AAAATGAGAA TATGAAGGCT
TATTGTATCG AGGCGGACAG ATTTGCTTTA GTTGAAGATA ATAACGACTT TATCGACAGA
TACGAAGAGC TTGCTGAAAA TTTACTAGAT ATCTTTAAAG GCAGGATGCT TAGCATAAAA
GATGAAAACG GCGTAGAGGT CGATGATATA GAAATTCACA ATACCATAGG CTTTGCGCTT
GATAGCGACC AGACTTTAAG AAAGGCAACC ATCGCGTTAA AATCAGCCAA ATCACTCGAT
AAAGACTATG TTTGCTACTT TAAAGGGCTA AGTCAAAAAG ATGAATACGC AAATCAGATC
GAGCGCTCAA AGCTGATCCA AAACGCCACG ATAAATGATA ACATTGTGCC GTATTTTCAG
CCGATATTTG ACGAGAAAAA GATCCCTATA AAATATGAAT GCTTGATAAG AATTTTAGAC
CGCGACGATG TCATCTCGCC AAGTGTATTT TTAGATATCT CAAAGCGTAT CAAGCGTTAC
GCAGACCTTG AAAAACAGCT CATCAAAAAG TGTTTTGAGC ACCTCATCGA AGATCCAAAT
TTGGTTCTTT CTATAAATTT AAGCAGCCGA GATATGATAG ATGGCGACGT CTCTGCGCTG
GTTTTAAATT TGCTAAATAA GCACAATGTT GCTGGCAGGA TAGTGTTTGA GATAGTTGAA
GACGAGGAGC TAAAGAGTGC TGAGCGCGTC TCAGTCTTTA TCGAGCGAGC AAAGAGCATG
GGCGCTATGA TAGCGATTGA TGACTTTGGC TCTGGCTACT CAAATTTCTC TTACATCATA
AAGATCAAGC CAGACTACGT GAAGATCGAT GGCTCTATCA TCAAAGATAT CGATATCAAT
AAAGACTCAT ACGCCATCGC AAGCGCGATC GTGGCATTTG CAAAGGATCT TGGCATAAAA
ACGATCGCAG AGTATGTTCA TTCTAAAGAA ATCTTTAACG TCTGTAAGGA GATAGGCATC
GACGAATTCC AGGGATTTTA CTTGGGAATT CCTTCTAAAA AGGCGTTTTA G
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| Protein sequence | MPSDESQKKH FSMVKTVTLV VVLLFAFFVI ENLTVYSYKY NNALSTNNFN LKKRTEYLTY
QYVNYLKNIS KFNIIDFQNY ITDNAVGDIF LLKENGKNGF KIEASSNKSL VNKDYEDKSC
GDIYSHDFQK DYFWAEILPE NSAKVCMFVA VNDYILGFKA HIDQRITGTS DPFYFQWLMK
NMTLTLILSS IGLFLGLAVC LWFVFKYLNI KFDYLKVKEE STIKIAELKE RLYIDPMTGL
FNKAALIKDA SEYKYPKVIL MDIDDFGKMN DYYGKYVCDQ ILKQMANLIK EFAKNENMKA
YCIEADRFAL VEDNNDFIDR YEELAENLLD IFKGRMLSIK DENGVEVDDI EIHNTIGFAL
DSDQTLRKAT IALKSAKSLD KDYVCYFKGL SQKDEYANQI ERSKLIQNAT INDNIVPYFQ
PIFDEKKIPI KYECLIRILD RDDVISPSVF LDISKRIKRY ADLEKQLIKK CFEHLIEDPN
LVLSINLSSR DMIDGDVSAL VLNLLNKHNV AGRIVFEIVE DEELKSAERV SVFIERAKSM
GAMIAIDDFG SGYSNFSYII KIKPDYVKID GSIIKDIDIN KDSYAIASAI VAFAKDLGIK
TIAEYVHSKE IFNVCKEIGI DEFQGFYLGI PSKKAF
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