| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0243 |
|---|
| Symbol | |
|---|
| ID | 5596183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1654746 |
|---|
| End bp | 1655576 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640930201 |
|---|
| Product | putative periplasmic protein |
|---|
| Protein accession | YP_001467478 |
|---|
| Protein GI | 157164911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGCTCTTTTT GGCTGCTGGC GTGTTAAGTG CCTTAAATTT ATATTCAGCT
CAGATGATAA ACGGCATCGC AGCTATCGTG GAGAACGAGC CTATCACGCT TTACGAGGTT
TATAGTTTGA AGGAACAGCT AAAGACAACA GAGCAGGATG CTTTAAATTT GCTTATCAGG
GATAGGCTTG AAGATGCGCA GATAAAAAAC TTAAATTTAA GCGTTACGCC TTTTGAGCTA
AACGACAGGA TCGAGGCGAT CGCAAAGCAA AATGGCATGA CAAATTCACA GTTTAGAAAC
TCTATCCAAG CTCAGGGCAT GGACTTTTTG GACTTTAAAA ACAACCTAGA GCACAAGATG
CTTCAAGAAA AACTTTATAA AAGCATAGCT GCTGAGGCTG GCAAGAACAT AAACGAGCAA
AAAGCAAAGG CGTATTTTGA CGCTAATCCT GATAAATTTA AGGTCTTTAG CACCGCTAGA
GTCGTAGTTT ATAGAGCAAA AGACCCTGAT CTGCTTGAAG CTCAAAAGAC AAGTCCAAAA
CTGCTAGACG GCGTGCAAAC GCAAGAGGTC AGTTTGGACT ATCAAAGCAT AGATCCAAGG
CTTGCTGCTA TCATCTCAAG CACGAATAAC GGCGACTACA CACAGCCTTT GCAAGGACCT
GATAGCTTTG ATATGTTTTT AGTAAAAGAG AAGATCGGCT CATACACACC AAGCTTTGCT
GATGTAAAAG ATAACGTTAT AAACGAGCTT TACCAAGGCG AGCAAGAAAA ATTAATGAGT
GATTACTTCG AAAAACTTCG CGCAAAAGCA AAAATTCAAA TCCTAAGATA A
|
|---|
| Protein sequence | MKKLLFLAAG VLSALNLYSA QMINGIAAIV ENEPITLYEV YSLKEQLKTT EQDALNLLIR
DRLEDAQIKN LNLSVTPFEL NDRIEAIAKQ NGMTNSQFRN SIQAQGMDFL DFKNNLEHKM
LQEKLYKSIA AEAGKNINEQ KAKAYFDANP DKFKVFSTAR VVVYRAKDPD LLEAQKTSPK
LLDGVQTQEV SLDYQSIDPR LAAIISSTNN GDYTQPLQGP DSFDMFLVKE KIGSYTPSFA
DVKDNVINEL YQGEQEKLMS DYFEKLRAKA KIQILR
|
|---|
| |