Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0101 |
Symbol | |
ID | 5596215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1054475 |
End bp | 1055680 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640929608 |
Product | putative periplasmic protein |
Protein accession | YP_001466899 |
Protein GI | 157164810 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTTT TAAAAAAAGA TAAGATACAA AATAAACAAA TTTCAAATGA AGGAGCTTAT ATGAATAATG ACTTGCGTCA AAAGATAAAT AGACGCTTAA GCGAACTTAG TGCATTGTCT AAGATGAAAA ATGACACTAG TATTGCGCAG CTTTTAAAAG ATAAGGGCTT TACTAGGCGT GATTTTATGA AGTGGGCTGG TGCGATGACA GCTTTTATGG CATTGCCAAG TGCGATGACA CCGATGGTTG CTCGTGCTGC TGAGCTAAGT GATAGGCTCC CTGTGATATG GCTTCACATG GCAGAATGCA CTGGCTGTAG CGAGGGCTTG CTAAGAACTG ACGCTCCAAG CATAGATAGC CTTATATTTG ACTACATAAG CCTTGAATAC CACGAAACTA TCATGGCAGC TGCTGGCTGG CAGGCTGAAG AAAATTTAGA GCATGCGATA GAAAAATATA AAGGCAGATA CATCTTGCTA GTTGAAGGTG GCGTTCCAAC TGGAGCTACT GAGCACTTTT TAACAGTCGG ACCTCACGGC ACAAGCGGCA AAACTCACGC TGTAAATGCC TCTGCTAACG CTGCTGCTAT CTTTGCTATT GGCACCTGTT CTAGCTTTGG CGGTATCCAA GCAGCTAAGC CAAATCCAAC AAATTCAGTC GGTCTTTCAA AGGTGACTGA TAAGCCCGTC ATAAACGTAC CAGGCTGTCC TCCAAGCGAG AAAAACATCG TTGGCAACGT GCTTCACTAC TTGCTATTTG GCACTTTGCC TGCACTTGAT GTTTATAACA GACCAAAATG GGCTTATGGC TTAAGAATTC ACGATCTTTG CGAAAGACGT GGCCACTTTG ACGCAGGCGA ATTTGTCCAA AGCTTTGGCG ATGAAGGCGC AAAAAATGGC TACTGCTTAT ACAAAGTAGG CTGTAAAGGC CCATATACAT TTAATAACTG CTCACGCGAG AGATTTAATC AACACACATC ATGGCCAGTT CAAGCAGGTC ACGGCTGTAT AGGCTGCTCA GAGCCAGACT TCTGGGATAC GATGGGGCCG TTTGAAGAGC CGATGGCTGA TAGGCTATTT GACACTGTTT TAGGGCTTGG CGCTGATAAT GTAAGTGATA AGATCGGCAT TGGAATTTTA GCACTTGCTG GTGTTGGCAT AGCGGCTCAC GCTGCACTAG CTTGTATGAG TAAAGATAAA GAATAA
|
Protein sequence | MYFLKKDKIQ NKQISNEGAY MNNDLRQKIN RRLSELSALS KMKNDTSIAQ LLKDKGFTRR DFMKWAGAMT AFMALPSAMT PMVARAAELS DRLPVIWLHM AECTGCSEGL LRTDAPSIDS LIFDYISLEY HETIMAAAGW QAEENLEHAI EKYKGRYILL VEGGVPTGAT EHFLTVGPHG TSGKTHAVNA SANAAAIFAI GTCSSFGGIQ AAKPNPTNSV GLSKVTDKPV INVPGCPPSE KNIVGNVLHY LLFGTLPALD VYNRPKWAYG LRIHDLCERR GHFDAGEFVQ SFGDEGAKNG YCLYKVGCKG PYTFNNCSRE RFNQHTSWPV QAGHGCIGCS EPDFWDTMGP FEEPMADRLF DTVLGLGADN VSDKIGIGIL ALAGVGIAAH AALACMSKDK E
|
| |