Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0051 |
Symbol | alaS |
ID | 5597711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1226761 |
End bp | 1229319 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929788 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001467070 |
Protein GI | 157164208 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATT TAGATATAAG AAAGGCATAT CTTGATTTTT TTAAATCAAA AGGTCACGAA GTAGTAGCTT CTGCACCACT TGTGCCAAAC GATGCAACAC TACTTTTCAC AAATGCTGGC ATGGTGCCAT TTAAGAGCAT TTTCACAGGC GAAGTGCCAC GCCCAACACC ACCTATCCGC ACTAGCTGTC AGACCTGCAT AAGAGCTGGC GGTAAGCACA ACGACCTTGA TAACGTCGGC TACACAGCGC GCCACCACAC ATTTTTTGAG ATGCTTGGCA ACTTTAGCTT TGGCGAATAC TTCAAAAAAG AGGCGATCGC TTACGCTTGG GAATTTGTCA CAGAGGTGCT AAAACTACCA AAAGATAAGC TTTATGTAAC TGTTCATGAA AGCGACTATG AGGCGTTTGA AATTTGGAGC ACTCACATCG CAAAAGAGAG GATTTACCGC TTCGGCGACC ACGATAACTT CTGGCAGATG GGCGATACTG GACCATGCGG CCCTTGCAGT GAAATTTTTT ACGATCAAGG GGCTGAACAC TTTAACACGC CTGAAGACTA CATGGGCGGC GACGGAGATA GATTTTTAGA AATTTGGAAC CTTGTTTTCA TGCAATATGA AAGAAGCGCG GATGGCAAGT TAAGCCCACT GCCAAAGCCA AGCATCGATA CTGGCATGGG ACTTGAGCGC GTTACTGCTA TCTTGCAGGG TAAATTTAGC AACTACGACA GCACACTTTT TATGCCACTA ATTAGCGAAG TAGCAAAGCT TTGCGGCAAG CCATACGTCT ATGAAAGTGG TGCTAGCTAC CGCGTCATAA GCGACCACAT CCGCTCAGTC ACATTTTTGC TAGCTCAAGG CACGACATTT GACAAAGAGG GCCGTGGCTA CGTGCTTCGC CGTATCTTAC GCCGCGCGAT CCGCCATGGA TACTTGCTAG GCATAAAAGA GCCATTTATG TATAAGCTTG TCGATAAAGT TTGCGAGCTT ATGGGCGGAC ACTACACCTA TCTAAACGAT AAAAAAGCGG CTGTAAAAGA GCAGATCAAA CTTGAAGAAG AGAGATTTTT AGCGACTATC GCTAGTGGTT TAGAGCTATT TGAGAGCGAG CTTAAAAATA CAAAAGAAAT TTTTAGCGGA GAGGCTGCGT TTAAGCTCTA TGATACATTT GGTTTCCCAC TTGATCTAAC GGCTGATATG CTTAGAGAAA AGGGCTTAAA GGTCGATGAG GCAAGGTTCG ATGAGCTTAT GAGTGAGCAA AAAGCACGTG CAAAAGCTGC TTGGAAAGGC AGTGGCGACA AGAGTGCGAA GGGCGACTTT AAAGAGTTAC TTGAGAAATT TGGCGAGAAT AAATTTATAG GCTACGAAGA GCTTAAGAGT AAAAGTAAAA TTCTAGCCTT GCTTGATGAA GAATTTAAAA ATATAGATGG CTTAGATGCT GGCAAAGAGG GCTGGGTGAT GTTTGATGTC ACTCCATTTT ACGCTCAAAG TGGCGGCCAG TGCGGCGATA ACGGCAAGAT AGTTGGCAAA GCAGATGTAC TTGATACTGA GAAATTTCAT GGGCTAAATT TATCTTTAGT AAAAACTAGC GCGGCACTAA AAGTTGGCGA CGAAGTTGAG CTTGAAGTGG GCAGCGATAG AGCAGAAACT GCACGTCATC ACAGCGCTAC ACACTTGCTT CACGCAGCGC TTAGAGCAGT TGTGGGCACT CATATCGCTC AAGCTGGCTC AAACGTCGAG GCAGACAGGC TAAGATTTGA CTTCTCGCAT CCAAAAGCGC TAAGCGGCGA GGAAATTTCT AAGGTTGAAA ATTTAGTAAA TGAGTGGATC GTAAATGGCG CAAATGCAAA AACGCAGGTT ATGGAGCTTG AAGAGGCCAA AAAAAGCGGG GCGATCGCGC TATTTAACGA AAAATATGCC GACAAAGTAA GAGTTGTAAG CTTTGGCGAT GTGAGCAAAG AGCTTTGCGG CGGAACACAC GTGAAAAATA TAGATGAGAT CGGATCGTTT TTCATCACAA AAGAGAGCGG CGTAAGTGCT GGCGTTAGGC GTATAGAGGC TGTTTGCTCA AGAGCTGCGC TAAATTTAGC AAGGTCATTT AGAGCTGAGC TTGAAGAGTT AAAAGAAGAG CTAAAGAGCG CCGAGCCACT AAATGCCGTC AAAAAGCTAA AAGGCGAGAT AAAGGGCTTA AAAGATAAGC TAAAAAATGC TAAAAACTCT CACGCCCTAG CCTTTTTAAA CGTAAATGAT ACTAAGCTTT GCGTAGCTAG TATCGATAGT GGTGACATAA AAACTTTGAT AGATGAGTTT AAAAATGAGC ATGAAAAGGC TGCGATCTTG CTAATTCAAG TTGATGAAGA GGGTAAAATT TCTCTTGCAG CTGGCGTGAA AAATGCCCCT ATAAAAGCGG GTGCATGGGT CAAATTTGCA GCGCAGATCC TTGGCGGAAA TGGCGGCGGT AAAGATGACT TTGCAACGGC TGGCGGCAAA AACGCTCTAG CCATCGAAGA TGCCATAAGA AGCTCGGTAG AGTACGCAAG GCAAGCTTTA GAAAAATGA
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Protein sequence | MQNLDIRKAY LDFFKSKGHE VVASAPLVPN DATLLFTNAG MVPFKSIFTG EVPRPTPPIR TSCQTCIRAG GKHNDLDNVG YTARHHTFFE MLGNFSFGEY FKKEAIAYAW EFVTEVLKLP KDKLYVTVHE SDYEAFEIWS THIAKERIYR FGDHDNFWQM GDTGPCGPCS EIFYDQGAEH FNTPEDYMGG DGDRFLEIWN LVFMQYERSA DGKLSPLPKP SIDTGMGLER VTAILQGKFS NYDSTLFMPL ISEVAKLCGK PYVYESGASY RVISDHIRSV TFLLAQGTTF DKEGRGYVLR RILRRAIRHG YLLGIKEPFM YKLVDKVCEL MGGHYTYLND KKAAVKEQIK LEEERFLATI ASGLELFESE LKNTKEIFSG EAAFKLYDTF GFPLDLTADM LREKGLKVDE ARFDELMSEQ KARAKAAWKG SGDKSAKGDF KELLEKFGEN KFIGYEELKS KSKILALLDE EFKNIDGLDA GKEGWVMFDV TPFYAQSGGQ CGDNGKIVGK ADVLDTEKFH GLNLSLVKTS AALKVGDEVE LEVGSDRAET ARHHSATHLL HAALRAVVGT HIAQAGSNVE ADRLRFDFSH PKALSGEEIS KVENLVNEWI VNGANAKTQV MELEEAKKSG AIALFNEKYA DKVRVVSFGD VSKELCGGTH VKNIDEIGSF FITKESGVSA GVRRIEAVCS RAALNLARSF RAELEELKEE LKSAEPLNAV KKLKGEIKGL KDKLKNAKNS HALAFLNVND TKLCVASIDS GDIKTLIDEF KNEHEKAAIL LIQVDEEGKI SLAAGVKNAP IKAGAWVKFA AQILGGNGGG KDDFATAGGK NALAIEDAIR SSVEYARQAL EK
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