Gene CBUD_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCBUD_1621 
SymbolfimT 
ID5457998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCoxiella burnetii Dugway 5J108-111 
KingdomBacteria 
Replicon accessionNC_009727 
Strand- 
Start bp1622653 
End bp1623213 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID 
Producttype 4 pili biogenesis protein (prepilin-like protein) 
Protein accessionYP_001424959 
Protein GI209364126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000506995 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTTC AGATGGATCG AGGGATGACA TTCCTGGAAT TGCTGATTGC TTTATCTCTG 
TTACTTATTT TTATTTCCCT TGTAGTGCCT GCTTGGCAGA CATTTTTGGC CCAAGAGCGA 
CTGGCAGCGT TGATTAATCG TTTAGCAGCG GCTATACATT TTGCTCGCAG TGAAGCCATT 
AAACGGCATA GTGTTGTGAC GCTCTGCGGA AGTAGTGATG GCCAACGTTG TGATGGTCAA 
TGGAGCAAGG GGCAAATAGT TCTTGCGAGT AGGGCAAAAG CGCCTCTTCG TTATTATGGA 
AAATACCCTC GTGACTATCA TCTTATTTGG CGCAGCAGCT TAAAAAAGAA TACTTACTTA 
AATTTCACCG GTGATGGGTT TACCGAAGGC CAACAGGGAA CATTTTATCT TTGTCCGCCG 
CACAATAGAA AGCCAATGAC GTGGAGTTTA GTAGTCACTC GCAGTGGTCG TTTGCGGGTG 
GAACGTGCTA AGGTATATTC TTTTTGTGAA ACAAATTTTG AGTCCGTCAT TCCCGCTTGC 
GCCGGAATGA CGGAACTATA G
 
Protein sequence
MFFQMDRGMT FLELLIALSL LLIFISLVVP AWQTFLAQER LAALINRLAA AIHFARSEAI 
KRHSVVTLCG SSDGQRCDGQ WSKGQIVLAS RAKAPLRYYG KYPRDYHLIW RSSLKKNTYL 
NFTGDGFTEG QQGTFYLCPP HNRKPMTWSL VVTRSGRLRV ERAKVYSFCE TNFESVIPAC 
AGMTEL