Gene CBUD_1487 details

Gene Information

• Locus tag: CBUD_1487
• ID: 5458168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: -
• Start bp: 1480617
• End bp: 1482668
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 45%
• Product: 3-hydroxyacyl-CoA dehydrogenase
• Protein accession: YP_001424831
• Protein GI: 209364088

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.432075
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATGGC AGCGAGGGAG TAAAATGCGG GAATTACAAA CTTACAAACA CTGGAAAATA 
AAAACCGATA AAGATGGTAT TCTTTGGTTA ACCCTCGACC GTGAAGATAC ATCGGTAAAT 
TCAATGAATC GGGAAGTTTT TACTGAATTT AATAAAGTGC TCGATGAAAT TGCTGCTCAA 
AATCCCATAG CCGTTATCCT TCAATCAGGA AAGAAAAAAG GATTCATCGC CGGTGCAGAC 
ATCAAACAAT TTACCGATTT AAAAAACAAA AATGAAGCCT TTGATTTAAT CCGCCAAGCG 
CAGCTCGTCC TTGATAAGCT CGAAGCGCTG CCCATGCCAA CCGTAGCGAT GATTAGCGGA 
TTTTGTTTAG GCGGCGGTTT GGAAGTGGCG CTTGCCTGTC GCTATCGAGT GGCGGAAGAT 
AATGAATCCA CGCTGATTGG ATTACCCGAA GTGAAATTGG GTATTCATCC AGGGTGGGGT 
GGTACCGTTC GATTGCCTAA ATTAATCGGC GCGCCGAAAG CAATGGAAAT TATGCTGCCA 
GGTGCAGCAG TTCCGGCGAG AAAAGCTGCT AAGCTTGGGA TGGTTGACGC CGCAGTACCG 
CTTCGTAATT TAGAAAATGC CGCTCGTTAT TTCGCTTTGC AAAAGCCCCC CGTCCATAAA 
CCGAAAGGAT GGGAAAAATA CACGAATGTA AGTTATATTC GCCCGTGGTT AGGGCGGTTA 
TTTTATAAAA AACTCTCTGC AAAAGTGGAA AAAACGCATT ACCCGGCGCC ATACGCCATC 
GTCCATAATT GGATCAAAGA GGGGGTTGGC AAAGAAGCCT ACTTCACAGA AGCTCAGTCG 
ATCGCGCAAT TAATGATGAC CGAGAGCAGT CGCAACATGG TGCGACTGTT TTTTTTAAGA 
GAACGCTTGA AGTCGCTCGC TAAAAAAACG CGCTATCTGC CGCAACAAAT TCACGTTATT 
GGCGCTGGTG TGATGGGCGG CGATATTGCA GCTTGGTGTG CGCTTCGCGG CATCCGCGTG 
ACTTTACACG ATAAATCAGC GGAAAAAATT GCGCCGGCGA TAAAGCGGGC GCATGCTCTT 
TATGAAAAAA AATTAAAAAT CCCGCGCTTA ATTCAGGCAG CGATGGACCG ATTAGAGCCG 
GATGTGGAAG GAACGGGCGT TAAAAAAGCG GATTTAATTA TTGAAGCTGT TTTTGAGGAT 
ATAAAAGTAA AGCAGGAAGT TTTAAGTGCT ATCGAACCGC AATTAAAACC CGAGGCTATT 
TTAGCGACTA ACACGTCCAG TCTTTCTTTA GATGAATTAA GTTCGGTGTT AAAAAACCCT 
GAGCGCTTAG TGGCTATTCA TTTTTTCAAT CCCGTTGCTA AATTACCGTT GGTTGAAGTG 
GCAAGCAGTC AGCAGACATC GGCGGACATT GCTGAAAAAG CGTTAGCGTT CGTGGGAGCT 
ATTGATAAAT TGCCGTTGGC GGTGAGCAGC AGTCCAGGAT TTTTAGTCAA TCGGGCATTA 
ATGGCTTATT TATTAGAAGC GAACCGTTGT TTAGACGAAG GGTTTTCCAT GGAACAAATT 
GATAAAGCGG CAACTGATTT TGGGATGCCC ATAGGTCCGA TCGAGCTAGC TGATCGGATT 
GGGTTAGACA TATGTTTGTC TGTTGCTCAA CATCTGAAAA ACTTTTACAA GCATGCCGAA 
GTTTCAGAAC GATTAAAAAC ATTGGTTAAG GAAGGTCATC TAGGCGCTAA AACGGGTCAA 
GGGTTTTATC ATTATCAAAA CGGAAGACGT GTTGAATCAA AGTCTACAGC CGAATCAACG 
AATCCTGATT TAACCGACCG GTTAATATTG CAACTCGTTA ATGAAGTCAA GAAATGTTTG 
GATGAGAAAG TGATTGACAA GGAAGATTTA GCCGATGCAG GGATCGTATT TGGCACGGGG 
TTTGCACCGT TTCGGGGTGG ACCGATGCAG TATGCCAAGA GTCGTGGAGA GGCCGATGTC 
GTGAAAACTT TAAAACGCTT AGCAAAACAA TACGGTGAAC GATTTTTGCC TAGCGAAGGA 
TGGTCCGCAT GA 

 

Protein sequence

MKWQRGSKMR ELQTYKHWKI KTDKDGILWL TLDREDTSVN SMNREVFTEF NKVLDEIAAQ 
NPIAVILQSG KKKGFIAGAD IKQFTDLKNK NEAFDLIRQA QLVLDKLEAL PMPTVAMISG 
FCLGGGLEVA LACRYRVAED NESTLIGLPE VKLGIHPGWG GTVRLPKLIG APKAMEIMLP 
GAAVPARKAA KLGMVDAAVP LRNLENAARY FALQKPPVHK PKGWEKYTNV SYIRPWLGRL 
FYKKLSAKVE KTHYPAPYAI VHNWIKEGVG KEAYFTEAQS IAQLMMTESS RNMVRLFFLR 
ERLKSLAKKT RYLPQQIHVI GAGVMGGDIA AWCALRGIRV TLHDKSAEKI APAIKRAHAL 
YEKKLKIPRL IQAAMDRLEP DVEGTGVKKA DLIIEAVFED IKVKQEVLSA IEPQLKPEAI 
LATNTSSLSL DELSSVLKNP ERLVAIHFFN PVAKLPLVEV ASSQQTSADI AEKALAFVGA 
IDKLPLAVSS SPGFLVNRAL MAYLLEANRC LDEGFSMEQI DKAATDFGMP IGPIELADRI 
GLDICLSVAQ HLKNFYKHAE VSERLKTLVK EGHLGAKTGQ GFYHYQNGRR VESKSTAEST 
NPDLTDRLIL QLVNEVKKCL DEKVIDKEDL ADAGIVFGTG FAPFRGGPMQ YAKSRGEADV 
VKTLKRLAKQ YGERFLPSEG WSA