Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1393 |
Symbol | smpB |
ID | 5458783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 1388915 |
End bp | 1389394 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | SsrA-binding protein |
Protein accession | YP_001424745 |
Protein GI | 154706819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00517715 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGC AAATTTCCAA AAAACCGGCA CAACGAACTA TCGCTTTGAA TAAAAAGGCA TTACACGACT ATTACGTTGA GCAGCGATTT GAGGCGGGGC TGGTGTTGGA AGGTTGGGAA GTCAAAAGTA TTCGCGCGGG CCGCGTGCAG TTGCGGGATA GCTATGTTGT TTTTAAAGGC GGTGAAGCCT GGTTAATTGG TGCGCACCTC TCCCCGCTCC CCAATGTCGC AGAATATATG AAAGCTGACC CTCAACGTTC GCGGAAATTG CTTTTGAACA AGCGTGAAAT TGGAAAACTG TTTGGAGCAG TTCAAAAACA AGGCTTAACG GTGGTTCCGC TGGATTTACA TTGGCATAAA AATCATGTCA AAGTTGAAAT TGCCCTTGCA AAGGGCAAAA AAACCCACGA TAAGCGAGAA ACCATCAAAC GCCGCGAGTG GGAGCGCGAG AAACATCGCG TGTTGAAATC TCATGGATAA
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Protein sequence | MNKQISKKPA QRTIALNKKA LHDYYVEQRF EAGLVLEGWE VKSIRAGRVQ LRDSYVVFKG GEAWLIGAHL SPLPNVAEYM KADPQRSRKL LLNKREIGKL FGAVQKQGLT VVPLDLHWHK NHVKVEIALA KGKKTHDKRE TIKRREWERE KHRVLKSHG
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