| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_1311 |
|---|
| Symbol | |
|---|
| ID | 5457610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | - |
|---|
| Start bp | 1302699 |
|---|
| End bp | 1307579 |
|---|
| Gene Length | 4881 bp |
|---|
| Protein Length | 1626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | NAD-specific glutamate dehydrogenase |
|---|
| Protein accession | YP_001424664 |
|---|
| Protein GI | 209364039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.283879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATACAG GGGTATCCAT TGTGTCACAT GATCATTTGA CTTCGGTCGA TAGAATCGTT
GAAAAAGTCG TTACTTATGC GGAAAAGCAA TTGCCTAAAG AGAAAATTGC TTTAATTATC
AAATTTATCC GACTTTACTA CGCTCACGTC GCATTAGAAG ATATAAAAGA ACGTTCTATC
TCCGACTTAT ACGGCGCGGT GATGTCGCAC TGGGAGTTGA TGCTATACCG TAAGCCGAAT
GAAGTTAAAA TTCGCGTATT TAATCCCCAA TTAGATCGGG ATGGCTGGCA GTCTACGCAT
ACTATTATTC AAGTGGTTAC CCAAGATATG CCGTTTTTGG TGGATTCCAT CCATATGGAA
ATTAATCGAT TAGGCCTCAC CACCCATTTG ATGATCCACA TTGGGGGGAT AAAAGTTTGT
CGGAATAAGA AAAACCAAGT GGATGACGTT CTGGCTTACC ACGTACAACA TCATAAGGAA
AGCACGCTAG AGGCGCCTAT CTCCATGGAA ATCGATCGGC AAACCGACCC CAAAGTATTA
GCTGATATTC AACGTAATAT TCGCCGAGTT TTAAGGGATG TTCGCGTAGC CGTTGAAGAT
TGGGGATTGA TGCGAGAGCG TGTGCAAGAA GCCCTCTCAG AATTAGACCC TGCTAAGATG
GTTCAAGATC CAGAGCAAAT TAAAGAAACT AAAGCGTTTT TAAATTGGCT GATGGATAAT
CATTTTACTT TTTTAGGGTT TCGTGATTAT GAATTGGTTG GCGAAGGTAA GGAACAGGCT
TTACGTTTAA TTCCTGAATC GGGTTTAGGC GTGTTGCATG ATCATACGCA CAGTAAAATG
TTAAGACAAT ATGCCGATTT GCCAAAAGCC GCTCGAAAAA TGGCGTTATC GACGGAACAA
ATATTGATTT TATCGAAAAC GAATACGTTA TCAACCGTTC ATCGACCCGC CTACACGGAT
TATATTGGCG TTAAACGACT TAACGAAAAA GGAGAATTAA TTGGTGAACG GCGTTTTATT
GGTCTTTATA CTTCGGATGT ATACCGATCC GACCCTCGCG TCATTCCTAT TATTCGGCAC
AAAGTCGAAT CGGTCTTGAA GCGTTCCCAA TTACCCGCCA AAAGTCACAG TGGAAAAGAT
TTACTGCATA TTCTAGCTAC CTTGCCACGC GATGATTTAT TCCATGCAAC GGTGGATGAA
TTATTTCACT GGGCAATGGG TATTTTGCAT TTGCAAGAAC GACGCCGTAT TCGTTTATTT
GTGCGCAAAG ACGCTTATGG CCGTTTCATG TCGTGTTTGG TGTATGTGCC CCGTGATTAT
TTTACAACGG ATTTAGTAAT GCGCATGCAG GATATTTTAA TGAAAGCATT CCGTGGATTG
GACGTGAGTT TTACGACTTA TTTTTCCGAA TCAATACTCG CTCGCATTCA CTTTGTTATC
CGTATCAATC CGCGGCGTGC TTTGGAATAC GATGTAAAAG AGTTAGAAGA AAAATTAGCT
AAAGTAGGCG TATCCTGGGA AGACGAATTT TATAAACACG CGTTGGATTA TTTTGGCGAA
GAACGGGGCA ATGATATTTT TAATCGGTAT CGACATGCCT TTTCTTCTGC CTATCGCGAA
GAATTTCAAG CACAACAAGC TGTGTACGAT GTTGCGCATA TTGAGAAATT ATCGGAGCGA
ACCCAATTAG GCATGAGTAT TTATCGTCCT CGTGGCGCTG CGCGGGATGT GATTCGTTTT
AAATTATTTC ATCCCGATTT TACCGTCCCT TTATCCGACG CTTTACCGAT GTTAGAAAAC
ATGGGGTTGC GCGTAGTAGG TGAGCAGCCT TATGAATTAA CTTTTCAAGA TGGACGCAAA
GTTTGGATTA ATGATTTTCT GATGACTTAC GCGAGGGAAC CTGAGTTTGA AATTGAAACG
GTTAAAACAA TTTTTCAAGA AGCGTATGAA AAAATCTGGT TTGGTGCGGC TGAAGACGAT
GGTTTGAATC GTTTGGTGTT AGAAGCCCAA TTAACATGGC GGGAAATAGC TGTTTTTCGT
GCTTATATGA AATATTTCCG TCAAGTAGGG TTCACCTTTA GTGAAGGATA TATTACGGAC
GCTTTAGTGG ATAACCCAAA AGTGGCGCGG CTGCTCATCG AATTATTTAA ATGTTATTTT
GATCCTGAAC GAGCGACGAC GTCAAAAGAA AAAGCGCAAG ACATCGAACA AATCATTCAA
AAAGGATTAG ATGAGGTAGC CGGACTCGAT GAGGACCGGA TTTTACGCCG TTATTTAGCC
TTGATCCACG CCACCTTACG TACCAATTAT TTTCAGCGTG ATGAAAAAAG GAATCCTAAG
CCCTATCTTT CCTTTAAATT GGATTCCTCA AAAATTCCTG ACATGCCTTT GCCCTTGCCG
AAGTATGAAA TATTCGTGTA TTCGCCGCGT TTCGAAGGAG TGCACTTGCG CGGTGCGGCT
GTGGCGCGAG GCGGTATCCG CTGGTCAGAC CGACGCGAAG ATTATCGAAC TGAAGTGTTA
GGATTAATGA AAGCGCAACA AGTCAAAAAT GCTGTTATTG TGCCGGCTGG AGCGAAGGGG
GGATTTTTCC CAAAACGTCT TCCGTCAGAA GGCAGTCGTG AGGAAATTCT ACAAGAAGGA
CTTTTCTGTT ATCGTAATTT TATTCGCGGT TTATTGGATT TAACCGACAA TTTGGAAAAT
GGGGAAATTG TTTCACCTAA AAATACCGTT TGTTATGATG GACCGGACCC TTATTTAGTT
GTTGCTGCAG ACAAAGGCAC GGCTACTTTT TCTGACGTAG CAAACAGTAT CGCCATTGAA
AAAAACTATT GGATGGGCGA TGCGTTTGCT TCAGGTGGTT CTACCGGTTA CGATCATAAA
AAAATGGGAA TTACGGCCCG CGGCGCATGG GTTGCAGCAA AACGGCATTT TCAAGATTTA
GGAACTAATT TAGATGAAGC CGAAATTACC GTCGTAGGTA TTGGCGATAT GAGCGGCGAT
GTGTTTGGTA ACGGGATGTT AATTTCACGT TATATTAAAT TAGTGGCTGC TTTTGATCAT
CGTCATATTT TTTTGGACCC CAATCCGGTC CCCACTTTAA GTTACGAAGA ACGCCTGCGG
TTATTTAATC TTCCACGATC AAGCTGGAAT GATTACGATC GCAGTTTATT ATCGGCAGGA
GGGGGCGTTT ATTCGCGGGC TGCAAAATCC ATTCAATTAT CACCCGAAGT TAAAGCGTTA
TTGCACAGTG AAAAAGATGT CATGGTGCCG AACGAATTAA TCCGAGCTAT TTTAAAAGCG
CCCGTCGATT TAATCTGGAA TGGAGGCATT GGTACTTATA TTAAGTCTAG CGAAGAAAAA
AATATCGATG TGGGCGATCG TAGTAACGAT AATTTAAGAG TGAATGCCAA AGATGTGCGA
GCGCGGGTAA TCTGTGAAGG GGGGAATTTA GGCGTGACCC AACTGGCTCG TATTGAGTAT
GAATTAAACG GCGGAAAAAT TAATACGGAT TTCATTGATA ATTCAGCGGG CGTGGATTGC
TCTGACCATG AAGTAAATAT AAAGATTTTG CTTAATCAGA TTGTTGCTAA TGGCAGTATG
ACAGAGAAGG ATCGCAATCG ATTATTAGCT AGTATGACAG ATGAAGTGGC TCAGTTAGTA
TTGCACGATA ATTATTTCCA AAATAAAGCG TTGAGTTTGG CATCGCATCT TGCCCTGCGC
GATATGGGTT TAAATATGCG TTTTCTTGAC GCTCTTGAAC AAGAGGGGAA AATTAATCGG
GCACTTGAAT TTTTGCCCGA TGATAAAGCG CTGTTGGAAC GTCGTGCGCT CGGTCTTGGT
TTAACTCGAC CTGAGTTAAG CGTTTTATTT GCCTATAGTA AGATTATTTT AAAAGCGCAA
ATTAAAACAT CCGTTGTGGT TGAAGACCCT TATTTATCAC GGTATGTGGC TTACGCATTT
CCCACACCTT TGCGAACTCG TTTTAGAGAG CAAATGAAGG AACATTATTT AGCTAAGGAA
ATTATCGCCA CTCAGTTAAG CAATCGCTTG GTTTCAATAA TGGGTATTAC GTTCATTTAC
CAAATGCAAG ACGAAATGAG TGTCTCGGTG CCTTCAATTA TGCGTGCTTT TGTGGCAGCG
ATGAAAATAT TTCAAATGGA AAAGCTGCTG GCCGATATCG ATGCACTGGA TTATAAGGTG
GATGCGGAAG TTCAATACCA AATGAATGTT GAAGCGATTC GCTTAATCCG GCGTGCTTCT
CGGTGGCTTT TGCGCCACCG TCGTGGCGAA CTTGACATCG CTTCGACGGT AACTCATTTT
GGTGACTATG TGGCTGCGAT TTATTTTCGA TTACCGAAAT TATTGTTAGG GGCGGATAAA
GAGGCAGTGG ACAACCATCA AAATAATTTG ATCGAACGCA ATGTGCCACC AGAACTTGCC
CTGCGCATTG CAGGTACAGC GCCACTTTTT CATGCTTTAA ATATTGTGGA AGCGGCAACG
ACGTATCATG AAGAAGTGTT TCGTGTGGCG AAAATTTACT TTATGCTCGC CGATCGATTG
GATTTATTTT GGTTCCGCGA AAGAATTAAC GCCTATCCTG TTGACGATCA GTGGGCAGTT
TTAGCAAGAG CCGCCTATAA AGGCGATTTA GATTGGATTC AACGCGAGCT CACCGTTCGG
GTGCTACTCG ATACGAAGGC ACGCAGTATC CCCGGCAAAG TTAAAGAATG GTTGGCCGAA
CACGATCCTA TGATTCAACG ATGGCAAACG ATTTTAGCGG CGATGCGCAG TGCAGAGAAA
AAAGACTTTG CTATACTATT TGTGGCAATT CGCGAGCTAT TCGATTTAGC TTCGAATGTG
GCTGCTGTCA ACGTGGAGTG A
|
|---|
| Protein sequence | MNTGVSIVSH DHLTSVDRIV EKVVTYAEKQ LPKEKIALII KFIRLYYAHV ALEDIKERSI
SDLYGAVMSH WELMLYRKPN EVKIRVFNPQ LDRDGWQSTH TIIQVVTQDM PFLVDSIHME
INRLGLTTHL MIHIGGIKVC RNKKNQVDDV LAYHVQHHKE STLEAPISME IDRQTDPKVL
ADIQRNIRRV LRDVRVAVED WGLMRERVQE ALSELDPAKM VQDPEQIKET KAFLNWLMDN
HFTFLGFRDY ELVGEGKEQA LRLIPESGLG VLHDHTHSKM LRQYADLPKA ARKMALSTEQ
ILILSKTNTL STVHRPAYTD YIGVKRLNEK GELIGERRFI GLYTSDVYRS DPRVIPIIRH
KVESVLKRSQ LPAKSHSGKD LLHILATLPR DDLFHATVDE LFHWAMGILH LQERRRIRLF
VRKDAYGRFM SCLVYVPRDY FTTDLVMRMQ DILMKAFRGL DVSFTTYFSE SILARIHFVI
RINPRRALEY DVKELEEKLA KVGVSWEDEF YKHALDYFGE ERGNDIFNRY RHAFSSAYRE
EFQAQQAVYD VAHIEKLSER TQLGMSIYRP RGAARDVIRF KLFHPDFTVP LSDALPMLEN
MGLRVVGEQP YELTFQDGRK VWINDFLMTY AREPEFEIET VKTIFQEAYE KIWFGAAEDD
GLNRLVLEAQ LTWREIAVFR AYMKYFRQVG FTFSEGYITD ALVDNPKVAR LLIELFKCYF
DPERATTSKE KAQDIEQIIQ KGLDEVAGLD EDRILRRYLA LIHATLRTNY FQRDEKRNPK
PYLSFKLDSS KIPDMPLPLP KYEIFVYSPR FEGVHLRGAA VARGGIRWSD RREDYRTEVL
GLMKAQQVKN AVIVPAGAKG GFFPKRLPSE GSREEILQEG LFCYRNFIRG LLDLTDNLEN
GEIVSPKNTV CYDGPDPYLV VAADKGTATF SDVANSIAIE KNYWMGDAFA SGGSTGYDHK
KMGITARGAW VAAKRHFQDL GTNLDEAEIT VVGIGDMSGD VFGNGMLISR YIKLVAAFDH
RHIFLDPNPV PTLSYEERLR LFNLPRSSWN DYDRSLLSAG GGVYSRAAKS IQLSPEVKAL
LHSEKDVMVP NELIRAILKA PVDLIWNGGI GTYIKSSEEK NIDVGDRSND NLRVNAKDVR
ARVICEGGNL GVTQLARIEY ELNGGKINTD FIDNSAGVDC SDHEVNIKIL LNQIVANGSM
TEKDRNRLLA SMTDEVAQLV LHDNYFQNKA LSLASHLALR DMGLNMRFLD ALEQEGKINR
ALEFLPDDKA LLERRALGLG LTRPELSVLF AYSKIILKAQ IKTSVVVEDP YLSRYVAYAF
PTPLRTRFRE QMKEHYLAKE IIATQLSNRL VSIMGITFIY QMQDEMSVSV PSIMRAFVAA
MKIFQMEKLL ADIDALDYKV DAEVQYQMNV EAIRLIRRAS RWLLRHRRGE LDIASTVTHF
GDYVAAIYFR LPKLLLGADK EAVDNHQNNL IERNVPPELA LRIAGTAPLF HALNIVEAAT
TYHEEVFRVA KIYFMLADRL DLFWFRERIN AYPVDDQWAV LARAAYKGDL DWIQRELTVR
VLLDTKARSI PGKVKEWLAE HDPMIQRWQT ILAAMRSAEK KDFAILFVAI RELFDLASNV
AAVNVE
|
|---|
| |