Gene CBUD_1188 details

Gene Information

• Locus tag: CBUD_1188
• ID: 5458402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: -
• Start bp: 1160217
• End bp: 1161434
• Gene Length: 1218 bp
• Protein Length: 405 aa
• Translation table: 11
• GC content: 40%
• Product: N-acetylmuramoyl-L-alanine amidase
• Protein accession: YP_001424552
• Protein GI: 209363990

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0677678
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTATGCTC AATGGCCAGA AGGTATTATT TACTTACCCC GTAGCCGTAA AAAACGTTAT 
GCGAAGCGCT ATTCCAATAG AAAAAATAGA GCGCCTATTC CCAATCGAAC AGACATTGAT 
TTGCGTCCAG AAAAGGCAAC GAATCGGAAG GAAGTAGGCC ATTGGGAATC CGATACCCTG 
GAGTCGGATC GATCTCGGGT GGTTTATAAC GTCATTGAAG AGCGTGTATC TCGTTTAGTA 
AAGATAACCC GATTAGAAAA CAAAAAAGCA GCCTCAACCA AAGAAGCCGT TATAAAACGG 
TTAGCCTCTC TCCCTAAAAA GGCTCGTAAA AGCATTACTT ATGACAACGG GTCAGAAAAT 
TATTATCATC AAGAGATAAA TTCTGTCTTA AAAACAAAAT CCTACTTTTG CAAGCCTTAT 
CATAGTTGGG AAAAGGGAGC CATTGAAAAT ACCAATGGAC TCATTCGTCG ATTTATACCT 
AAAAAAACGG ATCTCGCCAA TTTTTCTCAG GAACAACTTG ACCAAATTGA ATATTTGTTA 
AATCATCGAC CACGCAAATG CCTAGGATTT AAAACCCCTT ATCAGGTCTT CCTTAAGCGA 
ACTGGTGCAA TTCCTCCTTG A 

 

Protein sequence

MFNVNAMRRW RIIIFLLSFW TLSSFANSNQ IIELHVYPHA EDCHLVFDSP SAIHFHYFEL 
TKPERLVVDI QQAHFIHAVK KNLSGPLIKT IRTGYHKNHT LRVVFDLKSP IKIHAVPLKP 
DSKSPHFRLL IDLISPSHKI KEKTKTIKNI IASPIKSPQP SRARDIIVVI DPGHGGRDPG 
ATGPAGAHEK DIVLKISRYL QRDINRQPGF KAYLTRKGDY YLTLRQRLAI ARRYRADMFI 
AVHADAYKNH RSQGASVFAL SQRGATSEAA RWLATKENES ELMGGVDLAD KNNLLKSVLI 
NLSQTATIRD SLHIGQRIIR ALKNIGRLHH SRVEQAAFVV LKSPDIPSLL VETGFISNPY 
EERKLLNPIY QQHIASALMQ GICAYFIYSP PRGTWLAQKV KWDQH