Gene CA2559_13113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_13113 
Symbol 
ID9298113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand- 
Start bp2838723 
End bp2839271 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content31% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003717364 
Protein GI298209185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.611715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTA AAGAAACACC ACTTAAAGAC TGTTATATTA TAGAACCTAA GGTGTTTTAT 
GATGAGCGTG GTTATTTTTA TGAGCAATTT AATGAGCAGG TATTTCAAGC CGAAACTAAA 
TTGAATGTAA AGTTTGTTCA GGATAATGTA TCTGAATCAA AATTTGGAGT AATTAGAGGG 
TTACATTATC AACAAGGGAT GCATTCGCAA GCTAAATTAG TGACTGTTTT AGAAGGCGAA 
GTTTTAGATG TGGCTATAGA CTTAAGAAAA AACTCGCCAA GCTTTGGCAA GCAGTTCTCT 
ATGATTTTAT CTTCAGAAAA TAAAAAACAA TTATTTGTAC CAAAAGGCTT CGCTCATGGC 
TTTTCTGTAT TAAGTAAAAC AGCACGTTTC TTTTATAAAT GTGATGCATA TTATAATAAA 
GAGAGTGAAA CAGGGATTAA ATATAATGAC GAAACTTTAA ATATAGATTG GCAACTAAAG 
GATGGTGAAA TTATAGTTAA TGATAAAGAT AAACACTTAC CTGATTTCAA AAGCGCAATT 
TACTTTTAA
 
Protein sequence
MTIKETPLKD CYIIEPKVFY DERGYFYEQF NEQVFQAETK LNVKFVQDNV SESKFGVIRG 
LHYQQGMHSQ AKLVTVLEGE VLDVAIDLRK NSPSFGKQFS MILSSENKKQ LFVPKGFAHG 
FSVLSKTARF FYKCDAYYNK ESETGIKYND ETLNIDWQLK DGEIIVNDKD KHLPDFKSAI 
YF