Gene CA2559_12848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12848 
Symbol 
ID9298060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2784176 
End bp2785585 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content33% 
IMG OID 
ProducttrkA domain protein 
Protein accessionYP_003717311 
Protein GI298209132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTT CTTTTGCAGG AATTTTAGGT GGTAGCTGCA CCCTAATGGG AACCTCAACA 
AACTTAATTG TAAATAGTTT AGCTCAAGAA TATGGCGCAG AACGCTTGGG CTTTTTTGAG
TTTGCTATTT ATGGTTTATG TTTTTTAGTG ATAGGTATTG TGTATATGGT GTTTGCTTCA
AAATTTTTAC CGAAAACAAA ACCCGAAGAA ATAGACTCCG AATACGGTCT AGATTCTCTA
GTGGCAACTG TTGAAATTGC TCCAGATTCT AAATTGATTG GCAAACGTAT TGAGGACACT
ATCTTTTATG GTGATAAAGA TCTTTCTGTC TTAAAATTAA TACGAGAAGA CAATGTTATA
AATGAACCTG GAAGGTATAT ATCCCTAAGA GAAGAAGACA AATTAATTGT GATGTGCGAT
TTTGAAAATC TTGTAAAATT ATCTGAACAA GAGGAATTTA TAATCCACGA TAGCAAATTA
AAAACCACAG AAAAAACAAA TGAAGACAAC CAGGACAAAG CAGAACTAAA TAAACCGAAA
ACAACCTATG CAGAGCTTTT GTTATTACCT GGTTCAATTT TATTGGGAAA AACGCTAACG
GACCTAAGAA ATTATTCACT TAGAGGTGCA ACACCAATAG CTATTAAAAA ACGTAAAAAC
TTAAGAAATA CAAAGGAGCG CCTTATAAGA AAGGACTTTA ATGATATAAA TTTAAAACCA
GGCGACCGTA TACTTATTGA AACATCAGAC AAATCGCTTT CTGAGATAGA TACTATTGAA
AATGTTGCTG TTATAGATAG ACATGATTTT GTAAACAGCG CTTCAAAACA AAAAAGAATA
ACAGCATTTA TAATTTTCTT ATTAGTTGTG GGCTTAGCTG CATCTGGTGT TCTTACAATT
TTAGCTAGTG CTATTACTGG TGTTGCACTA ATGCTGGGAA CAAAATGTCT TGACTTAAAT
AATACCTATA AAAAAATTGA CTGGCAGATT ATCTTTCTTC TAGCAGGTAT GATTCCGCTT
GGTGTTGCTA TGAGCAATAG TGGTGCAGAT ATGTGGATTT CTGAAAACCT TATAGCTATA
ATGGTTGGGA AAGGCGATGT ATTTGTACTT GGCCTTATTT TTCTTGTCAC TATGTTATTA
AGTGGTACAA TCTCCAATAA TGCCACAGCA ATTATCATGT TACCTATTGC AATTTCTGTT
GCCAATGGCT TAGGCTTATC TCTAAAACCT TTTATTCTTG CTATTATGTT TGCTGCTAAT
TTTAGTTTTT TCACGCCCGT TGGTTACCAA ACAAACACAC TAATTTACGG TTTAGGTATT
TATAAGTTTA AGCACTTCTT AATTGTTGGA GGTATTCTTT CTGTAATATT ATGGGTGTGC
GCTACTTTAC TTCTATCTAC ATTATTATAA
 
Protein sequence
MPISFAGILG GSCTLMGTST NLIVNSLAQE YGAERLGFFE FAIYGLCFLV IGIVYMVFAS 
KFLPKTKPEE IDSEYGLDSL VATVEIAPDS KLIGKRIEDT IFYGDKDLSV LKLIREDNVI
NEPGRYISLR EEDKLIVMCD FENLVKLSEQ EEFIIHDSKL KTTEKTNEDN QDKAELNKPK
TTYAELLLLP GSILLGKTLT DLRNYSLRGA TPIAIKKRKN LRNTKERLIR KDFNDINLKP
GDRILIETSD KSLSEIDTIE NVAVIDRHDF VNSASKQKRI TAFIIFLLVV GLAASGVLTI
LASAITGVAL MLGTKCLDLN NTYKKIDWQI IFLLAGMIPL GVAMSNSGAD MWISENLIAI
MVGKGDVFVL GLIFLVTMLL SGTISNNATA IIMLPIAISV ANGLGLSLKP FILAIMFAAN
FSFFTPVGYQ TNTLIYGLGI YKFKHFLIVG GILSVILWVC ATLLLSTLL