| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_11928 |
|---|
| Symbol | |
|---|
| ID | 9297875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2597065 |
|---|
| End bp | 2598696 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_003717127 |
|---|
| Protein GI | 298208948 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.680415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACAG TTTCAAATTT ATCTGTACAG TTTGGTAAGC GTGTCCTTTT TGATGAGGTT
AACACAACGT TTACTCAAGG TAATTGCTAT GGTATTATTG GTGCAAATGG TGCTGGTAAG
TCTACCTTCT TAAAAATCAT TTCGGGCAAG TCTGAGCCTA CTTCTGGTCA AGTGTCTTTA
GAGGCAGGAA AACGTATGTC TGTTTTAGAG CAAGACCATA CATTATATGA TGAGTATCCA
GTATTAGAAG CTGTTATAAT GGGTAATAAA CCATTATATG CTATTAAGAA AGAGATGGAC
AGCATTTATG CAAAAGAAGA TTTTGGAGAT GCTGATGCAG AACGCGTAGG AGAACTTCAA
GTAGATTTTG AAGAAATGAA TGGTTGGAAT GCAGATAGTG ATGCTGCGGC ATTATTATCT
AACTTAGGGA TAGAGCCTGC TTTGCATTAT ACAAAAATGG CAGATATAGA TGGTAAACTA
AAAGTAAGAA TTCTTTTAGC TCAAGCACTT TTTGGATCTC CAGATGTGCT TATTATGGAT
GAGCCTACCA ACGACTTGGA TTATGAAACT ATATCTTGGT TAGAGCATTT CTTGGCAAAT
TTTGAAAATA CAGTAATCGT AGTATCTCAC GACCGTCACT TCTTAGACGC TGTATGTACG
CATATTAGTG ATATAGATTT CGGAAAAATT AATCACTTCA GTGGTAACTA TACTTTCTGG
TATGAGTCTT CACAGTTAGC AGCAAGACAA CGCTCTCAAC AAAATAAGAA GGCAGAAGAA
AAGAAGAAAG AATTAGAAGA ATTTATAAGA AGATTTAGCG CCAACGTAGC AAAGAGCAAA
CAGGCAACAT CTCGTAAGAA GATGATTGAT AAGCTAAATA TTGGCGAGAT TAAGCCATCA
AGCCGTCGTT ATCCTGCAAT AATTTTTGAG CGCGAGAGAG AAGCTGGAGA CCAAATTCTT
AACGTAGAAA ACTTATCATC TTCAATAGAT GGAGAGTTGT TGTTTAAGAA TATTAACTTA
AATCTGGCTA AAGGAGATAA AGTGGTTGTC TTTTCTAGAG ACTCTAGAGC AACTACAGCA
TTTTATCAAA TACTAAATGG ACATCAAGAA GCAGAATCTG GCAAAGTTGA ATGGGGTATC
ACTACTAACC AATCATACTT ACCATTAGAT AATTCACAGT ATTTTGAAAG TGACCTTACA
TTAGTTGATT GGTTGAGACA ATGGGCTAAA ACAGAAGAAG AACGTGAGGA AGTACACATA
AGAGGTTTCT TAGGTAAAAT GATTTTTAGT GGAGAAGAAG CACTTAAAAC CTGTAACGTA
CTTTCTGGAG GAGAAAAAGT GAGATGTATG TTAAGCCGTA TGATGATGAT GCGTGCTAAT
GTTTTAATGC TAGACGAGCC TACAAACCAC TTAGATCTAG AATCTATTAC AGCATTTAAT
AACTCTTTAA AGAACTTTAA GGGAACGGTT ATGTTTACAA CACATGATCA CGAATTTGCA
CAAACCGTAG CAAATAGAGT AGTGGAGCTT ACACCTTCTG GAGTTATAGA TCGTTACTTA
ACGTTTGATG AGTATATGAG TGATAAGAAC ATAAAAGAAC AGCGTGAGAA AATGTATGCA
GTTAATGCGT AA
|
|---|
| Protein sequence | MLTVSNLSVQ FGKRVLFDEV NTTFTQGNCY GIIGANGAGK STFLKIISGK SEPTSGQVSL
EAGKRMSVLE QDHTLYDEYP VLEAVIMGNK PLYAIKKEMD SIYAKEDFGD ADAERVGELQ
VDFEEMNGWN ADSDAAALLS NLGIEPALHY TKMADIDGKL KVRILLAQAL FGSPDVLIMD
EPTNDLDYET ISWLEHFLAN FENTVIVVSH DRHFLDAVCT HISDIDFGKI NHFSGNYTFW
YESSQLAARQ RSQQNKKAEE KKKELEEFIR RFSANVAKSK QATSRKKMID KLNIGEIKPS
SRRYPAIIFE REREAGDQIL NVENLSSSID GELLFKNINL NLAKGDKVVV FSRDSRATTA
FYQILNGHQE AESGKVEWGI TTNQSYLPLD NSQYFESDLT LVDWLRQWAK TEEEREEVHI
RGFLGKMIFS GEEALKTCNV LSGGEKVRCM LSRMMMMRAN VLMLDEPTNH LDLESITAFN
NSLKNFKGTV MFTTHDHEFA QTVANRVVEL TPSGVIDRYL TFDEYMSDKN IKEQREKMYA
VNA
|
|---|
| |