Gene CA2559_11848 details

Gene Information

• Locus tag: CA2559_11848
• ID: 9297859
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 2580180
• End bp: 2582225
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 32%
• Product: putative transmembrane HD family protein
• Protein accession: YP_003717111
• Protein GI: 298208932

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.1012
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAT TTGTAGACAA CCTGTATAAG AATCAGGCAT TGTTTTTTAA GATTATGTTA 
TGGGCACTGA GTACAGTGTT CATAGTTTAT CTTTTTCCAA AAGGAGGAAA ATTTAAATAT 
GAGATTACTA AAGGGAAACC TTGGCAGTAT GAAAACTTGT ATGCACCTTT TAATTTTGCT 
ATTCTCAAGA CAGATGAAGA GATAGCTTCA GAAAAAGAGG ATATAAGACA AAAGCAAATA 
CCGTACTATA ACTATGATAA TAAAGTTGTA GAAGAGGTTT CAGATAATAT TGCAAAAGTT 
TTTTCAGCTA CATTTAATGA TAGCATTAAA AGAACAGAAG GCAATCAACT TCTAAAATTT 
ACCAACACTA CATTTCAGGA TATATATGAA AAAGGTATTC TACAAGAAAT AGACGGTTTG 
GCAGAAGACC GCTTAGTGTT CTTAAAAAAA GGTAATGCTG CTGTTGAAGT AGAGTACGGA 
AGTCTTATTA AACAAAGCGA ATTAAGAGCC TACATTAAAA ATAAAGTTAA GCGAGCCAAT 
CTCTCTAGAT ATGAAACAGA ATTTGTAGAA CTGTTTTTTG ATTTAGTTAA ACCAAACGTT 
ATTGCTAATG AAACGCTTAC ACGTAAAGAA ATTGAGAGTA AACTACAGGA TATAAGTTAT 
ACACGTGGTA GTGTAACCAA AGGTAGTAGG ATTATTGCTC GTGGCGAGGT TGTTGAAGGC 
GATAAATATA AAATATTAAA TTCCCTAAAA GCAGAATTTG AGTCTCAAGT ATGGAGCCAA 
TCTAGTTACT ATTGGGTTAT TTTTGGTTAT ACCATTTTAG TATCTCTAGC TTTACTTATG 
TTACTTCTAT TTATTAAAAA GTATAGAATT GAGATTTTTG AGAATAACAC ACAGATAACA 
TTTATATTCT TTAATGTCTT AGTTATGGTA TTGCTTACAA CGCTGGTTGT AAAGTATAAC 
CCAGAATTTG TGTACTTAGT TCCCTTGTGT ATATTACCAT TAACCTTAAA AGCATTTTTC 
GATGCGAGAT TAGGTTTGTT TACACATGTT ATAACAGTAT TATTATTAGG CTTTATAGTA 
CCTAATAGTT ATGAATATAT GTTTTTGCAA ATTTTAGCTG GAATAGTAAC CATACTTACA 
GTATCTGAAC TTTATAAACG AGCTAATTTA TTTATCTCTG TAGCACAAAT AACTCTAGTA 
TATATCTTGG CATATTTTGC CTTTACTATA ACAAGAGAAG GTACAGTAAC AGCTATGAAC 
TGGGAAACTA TATTGTATTT TGTTACTTGT GGTTTAGCAA CCTTGTTTGT ACAACCTTTA 
ATTTATGCTT TTGAAAAAGT ATTTGGAATG GTTAGCGATA TGAGTTTGTT GGAGTTGTCT 
GATACAAACT CAAAGCTTCT CAAAAAAATG TCTAATACTG CTCCAGGAAC ATTTCACCAT 
TCATTAAATG TTGCCAATCT AGCTGAAGCT GCTGCTAATG AAATTGGAGC AAATGCTATG 
TTAGTTAGGG TAGGAGCGTT ATATCATGAT ATAGGTAAAA TGAAAAACCC AACCTATTTT 
ACAGAAAACC AAACCACATC TGTAAACCCT CATAACGATT TAGAACCACA AGAAAGCGCC 
AATGTTATTA TTGATCATGT ATTAGATGGT ATTGAGATAG CAAAGAAGAA TAAGCTACCA 
GACCGTATTA TAGATTTTAT AAGAACACAT CACGGTACAA GCTCTGTATA TTACTTTTAC 
ATGCAAGAAA AGAAAACAAA CGAAGATGCA GATGTAAGTG ATTTTAGTTA TCCTGGACCT 
ATACCATTTA GCAAGGAGAC AGCTATATTA ATGATGAGTG ATAGTGTAGA GGCAGCAAGT 
AAAAGTCTTA AAGAACCTAC TAGTACGTTA ATTGATAATT TTGTTGAAAA AATAATTAAC 
AAGCAGATGG ATGAAGGCCA ATTTTTAAAT GCCAATATAA CGTTTAAGGA AATACAGACC 
ATCAAGAAGG TTTTAAAACG AAAACTAAAC AATATCTATC ATTTAAGAAT AGAGTACCCT 
GAGTAG 

 

Protein sequence

MAKFVDNLYK NQALFFKIML WALSTVFIVY LFPKGGKFKY EITKGKPWQY ENLYAPFNFA 
ILKTDEEIAS EKEDIRQKQI PYYNYDNKVV EEVSDNIAKV FSATFNDSIK RTEGNQLLKF 
TNTTFQDIYE KGILQEIDGL AEDRLVFLKK GNAAVEVEYG SLIKQSELRA YIKNKVKRAN 
LSRYETEFVE LFFDLVKPNV IANETLTRKE IESKLQDISY TRGSVTKGSR IIARGEVVEG 
DKYKILNSLK AEFESQVWSQ SSYYWVIFGY TILVSLALLM LLLFIKKYRI EIFENNTQIT 
FIFFNVLVMV LLTTLVVKYN PEFVYLVPLC ILPLTLKAFF DARLGLFTHV ITVLLLGFIV 
PNSYEYMFLQ ILAGIVTILT VSELYKRANL FISVAQITLV YILAYFAFTI TREGTVTAMN 
WETILYFVTC GLATLFVQPL IYAFEKVFGM VSDMSLLELS DTNSKLLKKM SNTAPGTFHH 
SLNVANLAEA AANEIGANAM LVRVGALYHD IGKMKNPTYF TENQTTSVNP HNDLEPQESA 
NVIIDHVLDG IEIAKKNKLP DRIIDFIRTH HGTSSVYYFY MQEKKTNEDA DVSDFSYPGP 
IPFSKETAIL MMSDSVEAAS KSLKEPTSTL IDNFVEKIIN KQMDEGQFLN ANITFKEIQT 
IKKVLKRKLN NIYHLRIEYP E