Gene CA2559_10628 details

Gene Information

• Locus tag: CA2559_10628
• ID: 9297615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2320375
• End bp: 2321094
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 35%
• Product: short chain dehydrogenase
• Protein accession: YP_003716871
• Protein GI: 298208692

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.10817
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATT TACAAGATAA AGTAGCATTA ATTACTGGCG GAAGCAAAGG TATTGGGTTT 
GGTATAGCAG AATCATTCTT AAAACAAGGG ATGAAAGTTG CTGTTACCAG CAGGTCTTTA 
ACTAATGCAG AAGATGTTGC AAAAGAATTA AATGCTAAAT ATGAAGGAAA AGCAATTGGT 
ATAAAAGCCG ATGTGCGTAA TTACATAGAC CAACAAGAAG CTGTACGTAA AACTGTAGAT 
ACATTTGGAT CTTTAGATGT GCTTATTGCC AATGCTGGCT TAGGTCATTT TGGAAGTATT 
GAAGAGATAA CAGATAAAGA GTGGAAAGAA GTAATAGACA CCAACCTAAC AGGTGTCTTC 
TACTCTATTA AATCTGCAGT AGATGAGCTT AAGAAAAGTA AAGGTTATTT TATTTCTATC 
TCAAGTTTAG CCGGAACAAA TTTCTTTGCA GGTGGCTCTG CATATAATGC TAGTAAATTT 
GGTGTTACAG GATTTACACA AGCAGTAATG TTAGATTTAA GACAAAACGG TATTAAAGTA 
AGTACAATTA TGCCAGGTTC TGTAGCCACA CACTTTAACG GTCATACGCC TAATGAAGAT 
GATGCCTGGA AAATACAAAA GGAAGATTTA GGACAACTTA CAGTTGATTT ACTTAAGATG 
CCAGAAAATG CATTGCCTAG TAAGGTAGAG ATAAGGCCTA CAACACCACC AAGTAAATAA 

 

Protein sequence

MENLQDKVAL ITGGSKGIGF GIAESFLKQG MKVAVTSRSL TNAEDVAKEL NAKYEGKAIG 
IKADVRNYID QQEAVRKTVD TFGSLDVLIA NAGLGHFGSI EEITDKEWKE VIDTNLTGVF 
YSIKSAVDEL KKSKGYFISI SSLAGTNFFA GGSAYNASKF GVTGFTQAVM LDLRQNGIKV 
STIMPGSVAT HFNGHTPNED DAWKIQKEDL GQLTVDLLKM PENALPSKVE IRPTTPPSK